RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 OXGR1Q96P68 337 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 NCOR1P1Q9H4R4 102 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 UBE2ZQ9H832 354 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-201ENST00000261443 RNF114Q9Y508 228 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 PGPEP1LA6NFU8 196 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 F2Z2F3 143 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 F6UZH7 168 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 M0QZ24 198 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 SH2D1BO14796 132 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 NDUFB4O95168 129 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 CRYAAP02489 173 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 BLKP51451 505 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-201ENST00000261443 KCNE4Q8WWG9 221 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 RNF24Q9Y225 148 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 TIMM9Q9Y5J7 89 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 IGHV2OR16-5A0A0B4J2B6 119 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 IGHV2-70DA0A0C4DH43 119 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 GPX1P07203 203 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 TMEM11P17152 192 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 BMP5P22003 454 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 SUMO3P55854 103 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF90Q03938 601 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 PLPPR5Q32ZL2 321 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 ZDHHC23Q8IYP9 409 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 KLHDC1Q8N7A1 406 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF441Q8N8Z8 693 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 Q8N976 141 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 CADM4Q8NFZ8 388 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 OR6C1Q96RD1 312 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 HSPB7Q9UBY9 170 aa6.15□□□□□ -1.42
CSDE1-201ENST00000261443 PIGBOS1A0A0B4J2F0 54 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF816-ZNF321PA0A0X1KG74 233 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 LOC102725191A0A1B0GVB3 256 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 FCN1O00602 326 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 TMPRSS2O15393 492 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 RBFOX2O43251 390 aaKnown RBP eCLIP6.15□□□□□ -1.433e-6■■■■□ 22.3
CSDE1-201ENST00000261443 PDE6DO43924 150 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 NAPSAO96009 420 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 OTX1P32242 354 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-201ENST00000261443 GNB1P62873 340 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 MORN2Q502X0 79 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM196Q5HYL7 178 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 YAF2Q8IY57 180 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF114Q8NC26 417 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 OR13H1Q8NG92 308 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 OR5P3Q8WZ94 311 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF501Q96CX3 271 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-201ENST00000261443 DERL1Q9BUN8 251 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 TBL2Q9Y4P3 447 aaKnown RBP6.15□□□□□ -1.43
CSDE1-201ENST00000261443 MED12Q93074 2177 aa6.15□□□□□ -1.43
CSDE1-201ENST00000261443 FAM166BA8MTA8 275 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 H3BMH7 237 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 TUSC2O75896 110 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 MMP23AO75900 390 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 COX5AP20674 150 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 S100A7P31151 101 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 KIR2DL1P43626 348 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-201ENST00000261443 Q0VG73 95 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 VAMP3Q15836 100 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 KMT5CQ86Y97 462 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 TCTEX1D1Q8N7M0 179 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 LRFN3Q9BTN0 628 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 NRN1Q9NPD7 142 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 SLC35D1Q9NTN3 355 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 IL36GQ9NZH8 169 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 WNT16Q9UBV4 365 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 LRP4O75096 1905 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 HSPB6O14558 160 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF253O75346 499 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 COL9A1P20849 921 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 TNFSF4P23510 183 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 CD38P28907 300 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 TSPOP30536 169 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 NTSR1P30989 418 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 AMTP48728 403 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 YPEL5P62699 121 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 TFF2Q03403 129 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 VHLLQ6RSH7 139 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 OR10G8Q8NGN5 311 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 CORO2AQ92828 525 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 WNT10AQ9GZT5 417 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 KLRF1Q9NZS2 232 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 THADAQ6YHU6 1953 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 IGHV5-51A0A0C4DH38 117 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 GDF9O60383 454 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 TIAF1O95411 115 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 DEFA4P12838 97 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 HOXB2P14652 356 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 IER3P46695 156 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 ATP5G3P48201 142 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 THBS3P49746 956 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 FUT6P51993 359 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 RPL19P84098 196 aaKnown RBP6.14□□□□□ -1.43
CSDE1-201ENST00000261443 PHYHD1Q5SRE7 291 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 PLCXD3Q63HM9 321 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 Q6ZS49 121 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 LOXL4Q96JB6 756 aa6.14□□□□□ -1.43
CSDE1-201ENST00000261443 COL5A1P20908 1838 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms