RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 F2RP25116 425 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 BLKP51451 505 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 SLC38A11Q08AI6 406 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 OR8B8Q15620 311 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 PHYHD1Q5SRE7 291 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 ASCL4Q6XD76 172 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 ST8SIA1Q92185 356 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 SPSB1Q96BD6 273 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 ZNF586Q9NXT0 402 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 BET1LQ9NYM9 111 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 MYO9BQ13459 2157 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 IGKV3D-11A0A0A0MRZ8 115 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 OCIAD2Q56VL3 154 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 OR2D3Q8NGH3 330 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 GNB4Q9HAV0 340 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 CHTOPQ9Y3Y2 248 aaKnown RBP11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 ZNF407Q9C0G0 2248 aa11.3□□□□□ -0.6
TUBGCP4-201ENST00000260383 SLC17A3O00476 420 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 SERPINE2P07093 398 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 PMCHP20382 165 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 TNFSF4P23510 183 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 VAMP3Q15836 100 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 HIST3H3Q16695 136 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 Q6ZSR3 168 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 SPTBN5Q9NRC6 3674 aaKnown RBP11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 LOC102725191A0A1B0GVB3 256 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 FCN1O00602 326 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 HSPB6O14558 160 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 TMPRSS2O15393 492 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 KITLGP21583 273 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 DRD1P21728 446 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 IER3P46695 156 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 AMTP48728 403 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 RBM11P57052 281 aaKnown RBP11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 RPS16P62249 146 aaKnown RBP11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 ZNF90Q03938 601 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 RUNX3Q13761 415 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 NSDHLQ15738 373 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 GJC3Q8NFK1 279 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 KLHDC7BQ96G42 594 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 ERRFI1Q9UJM3 462 aaPredicted RBP11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
TUBGCP4-201ENST00000260383 TUSC2O75896 110 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 MMP23AO75900 390 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 TIAF1O95411 115 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 ACRP10323 421 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 RPL19P84098 196 aaKnown RBP11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 Q0VG73 95 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 Q8NFD4 153 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 SGCZQ96LD1 299 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 RPP25Q9BUL9 199 aaKnown RBP11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 PLEK2Q9NYT0 353 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 F5P12259 2224 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 DIDO1Q9BTC0 2240 aaKnown RBP11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 IGHV3-20A0A0C4DH32 117 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 MDFIC2A0A1B0GVS7 189 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 CD300LBA8K4G0 201 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 ZNF253O75346 499 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 PSG1P11464 419 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 HLA-DRB5Q30154 266 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 PLPPR5Q32ZL2 321 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 ZNF441Q8N8Z8 693 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 ZIC4Q8N9L1 334 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
TUBGCP4-201ENST00000260383 COL9A1P20849 921 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 MSR1P21757 451 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 GFRA1P56159 465 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 TFF3Q07654 80 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 KIAA1644Q3SXP7 199 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 LCN12Q6JVE5 192 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 Q6ZSR6 202 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 C10orf35Q96D05 121 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 CRISPLD2Q9H0B8 497 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 SLC35D1Q9NTN3 355 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 COPS7AQ9UBW8 275 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 TP73-AS1Q9UF72 201 aa11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.6
TUBGCP4-201ENST00000260383 A0A1W2PS18 150 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 DPRXA6NFQ7 191 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 TMEM196Q5HYL7 178 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 OR1L1Q8NH94 360 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 SPPL3Q8TCT6 385 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 SOHLH2Q9NX45 425 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 CLN8Q9UBY8 286 aa11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 RBM7Q9Y580 266 aaKnown RBP11.27□□□□□ -0.61
TUBGCP4-201ENST00000260383 IGLC7A0M8Q6 106 aa11.26□□□□□ -0.61
TUBGCP4-201ENST00000260383 HNRNPA1P09651 372 aaKnown RBP eCLIP11.26□□□□□ -0.61
TUBGCP4-201ENST00000260383 TIMP3P35625 211 aa11.26□□□□□ -0.61
TUBGCP4-201ENST00000260383 ZNF83P51522 516 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms