RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 BSXQ3C1V8 233 aa11.71□□□□□ -0.54
NCLN-201ENST00000246117 RBMXL3Q8N7X1 1067 aaKnown RBP11.71□□□□□ -0.54
NCLN-201ENST00000246117 OR5D13Q8NGL4 314 aa11.71□□□□□ -0.54
NCLN-201ENST00000246117 BOD1Q96IK1 185 aa11.71□□□□□ -0.54
NCLN-201ENST00000246117 DECR2Q9NUI1 292 aa11.71□□□□□ -0.54
NCLN-201ENST00000246117 PTPRQQ9UMZ3 2332 aa11.71□□□□□ -0.54
NCLN-201ENST00000246117 TRAV38-1A0A0B4J264 116 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 MDH2P40926 338 aaKnown RBP11.7□□□□□ -0.54
NCLN-201ENST00000246117 QRFPP83859 136 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 NABP1Q96AH0 204 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 OPN3Q9H1Y3 402 aaPredicted RBP11.7□□□□□ -0.54
NCLN-201ENST00000246117 RNF122Q9H9V4 155 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 MYOZ1Q9NP98 299 aaPredicted RBP11.7□□□□□ -0.54
NCLN-201ENST00000246117 FUT9Q9Y231 359 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 HBZP02008 142 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 CD55P08174 381 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 THBS3P49746 956 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 CCL8P80075 99 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 PMS2P11Q13670 270 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 ACOT6Q3I5F7 207 aaPredicted RBP11.7□□□□□ -0.54
NCLN-201ENST00000246117 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 SLX1AQ9BQ83 275 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 XKRY2A2RUG3 117 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 ZG16O60844 167 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 CDC34P49427 236 aaPredicted RBP11.7□□□□□ -0.54
NCLN-201ENST00000246117 IL22RA2Q969J5 263 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 R3HDM4Q96D70 268 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 CSPG4Q6UVK1 2322 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 LAMA1P25391 3075 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 PGA5P0DJD9 388 aa11.7□□□□□ -0.54
NCLN-201ENST00000246117 F6UZH7 168 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 TMPRSS2O15393 492 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 NTF4P34130 210 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 RTP5Q14D33 572 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 ZNF383Q8NA42 475 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 MRPL30Q8TCC3 161 aaKnown RBP11.69□□□□□ -0.54
NCLN-201ENST00000246117 RHOVQ96L33 236 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 ZPBPQ9BS86 351 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 LIME1Q9H400 295 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 RALYQ9UKM9 306 aaKnown RBP11.69□□□□□ -0.54
NCLN-201ENST00000246117 SRSF10O75494 262 aaKnown RBP11.69□□□□□ -0.54
NCLN-201ENST00000246117 COL10A1Q03692 680 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 OR10X1Q8NGY0 326 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 YLPM1P49750 1951 aaKnown RBP11.69□□□□□ -0.54
NCLN-201ENST00000246117 C11orf94C9JXX5 98 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 S1PR2O95136 353 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 PRB4P10163 310 aaPredicted RBP11.69□□□□□ -0.54
NCLN-201ENST00000246117 PRB3Q04118 309 aaPredicted RBP11.69□□□□□ -0.54
NCLN-201ENST00000246117 EDARADDQ8WWZ3 215 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 TM2D1Q9BX74 207 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 COMMD5Q9GZQ3 224 aa11.69□□□□□ -0.54
NCLN-201ENST00000246117 VPS13AQ96RL7 3174 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 ZNF716A6NP11 495 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 UCP2P55851 309 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 ERVFC1-1P60608 527 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 HES1Q14469 280 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 STUMQ69YW2 141 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 ZNRF1Q8ND25 227 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 RBKSQ9H477 322 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
NCLN-201ENST00000246117 BTBD17A6NE02 478 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 G0S2P27469 103 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 Q0VFX4 171 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 FAM53AQ6NSI3 398 aaPredicted RBP11.68□□□□□ -0.54
NCLN-201ENST00000246117 FAM89BQ8N5H3 189 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 KIAA1456Q9P272 454 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 OBSL1O75147 1896 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 TRAV17A0A0B4J275 112 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 RIPPLY2Q5TAB7 128 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 DRAM1Q8N682 238 aa11.68□□□□□ -0.54
NCLN-201ENST00000246117 LYRM2Q9NU23 88 aaPredicted RBP11.68□□□□□ -0.54
NCLN-201ENST00000246117 C1orf147Q96MC9 270 aaPredicted RBP11.67□□□□□ -0.54
NCLN-201ENST00000246117 HSD17B10Q99714 261 aaKnown RBP11.67□□□□□ -0.54
NCLN-201ENST00000246117 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 LRRC3CA6NJW4 275 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 LHFPL1Q86WI0 220 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 WBP1Q96G27 269 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 TNCP24821 2201 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 LINC01387J3KSC0 135 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 DNPH1O43598 174 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 PITX3O75364 302 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 KRTDAPP60985 99 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 ABHD12Q8N2K0 398 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 ZNF439Q8NDP4 499 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 MEGF10Q96KG7 1140 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 ZNF703Q9H7S9 590 aaPredicted RBP11.67□□□□□ -0.54
NCLN-201ENST00000246117 PTPN13Q12923 2485 aa11.67□□□□□ -0.54
NCLN-201ENST00000246117 TRAV34A0A0B4J273 112 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 CLDN14O95500 239 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 PLAUP00749 431 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 DHRS7BQ6IAN0 325 aaPredicted RBP11.66□□□□□ -0.54
NCLN-201ENST00000246117 VWA1Q6PCB0 445 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 Q8IYB0 196 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 KLF14Q8TD94 323 aaPredicted RBP11.66□□□□□ -0.54
NCLN-201ENST00000246117 MSI2Q96DH6 328 aaKnown RBP11.66□□□□□ -0.54
NCLN-201ENST00000246117 SMIM8Q96KF7 97 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 SGK494Q96LW2 274 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms