RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 C17orf100A8MU93 164 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 ST8SIA5O15466 376 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 RAMP3O60896 148 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 CD55P08174 381 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 CGB3P0DN86 165 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 CGB7P0DN87 165 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 EDDM3BP56851 147 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 CCL8P80075 99 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 KLRB1Q12918 225 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 LTC4SQ16873 150 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 ZNF295-AS1Q8N0V1 137 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 FGFRL1Q8N441 504 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 SLC25A31Q9H0C2 315 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 NCOR1P1Q9H4R4 102 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 PSG11Q9UQ72 335 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 ZZEF1O43149 2961 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 SMG1Q96Q15 3661 aaKnown RBP15.36■□□□□ 0.05
HOXC11-201ENST00000243082 WRBO00258 174 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 MORN2Q502X0 79 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 BTNL3Q6UXE8 466 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 ZCCHC24Q8N2G6 241 aaKnown RBP15.36■□□□□ 0.05
HOXC11-201ENST00000243082 KDF1Q8NAX2 398 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-201ENST00000243082 DEFB108BQ8NET1 73 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 C14orf79Q96F83 325 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 GAFA1Q96PS6 74 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 DIRC2Q96SL1 478 aa15.36■□□□□ 0.05
HOXC11-201ENST00000243082 F2RL2O00254 374 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 SEC11BP0C7V7 166 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 OMGP23515 440 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 CA7P43166 264 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 LOXL3P58215 753 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 PXDC1Q5TGL8 231 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 TEX36Q5VZQ5 186 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 BPIFCQ8NFQ6 507 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 JPT1Q9UK76 154 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 POLEQ07864 2286 aa15.35■□□□□ 0.05
HOXC11-201ENST00000243082 C17orf98A8MV24 154 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 SHISA9B4DS77 424 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 MED6O75586 246 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 SPP1P10451 314 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 CATR1Q13166 79 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 OR2B11Q5JQS5 317 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 OR6C3Q9NZP0 311 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 NUP50Q9UKX7 468 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 DYSFO75923 2080 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 LINC00473A8K010 186 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 YPEL1O60688 119 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 CRYZL1O95825 349 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 CLDN1O95832 211 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 MUC1P15941 1255 aaPredicted RBP15.34■□□□□ 0.05
HOXC11-201ENST00000243082 TNFRSF1AP19438 455 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 CASP6P55212 293 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 CLINT1Q14677 625 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 NCMAPQ5T1S8 102 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 UQCC3Q6UW78 93 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 ZNF66Q6ZN08 573 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 ZNF788Q6ZQV5 615 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 DMRTC2Q8IXT2 367 aaPredicted RBP15.34■□□□□ 0.05
HOXC11-201ENST00000243082 TCTEX1D2Q8WW35 142 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 EDARADDQ8WWZ3 215 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 PLPPR2Q96GM1 343 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 YPEL2Q96QA6 119 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 CCL13Q99616 98 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 NGBQ9NPG2 151 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 MMP26Q9NRE1 261 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 CALYQ9NYX4 217 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 GNG12Q9UBI6 72 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 MMP24Q9Y5R2 645 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 USF3Q68DE3 2245 aa15.34■□□□□ 0.05
HOXC11-201ENST00000243082 PROP1O75360 226 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 CST7O76096 145 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 GYPAP02724 150 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 P0C879 139 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 LINC00205P59089 165 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 BAXQ07812 192 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 ZNF816Q0VGE8 651 aaPredicted RBP15.33■□□□□ 0.04
HOXC11-201ENST00000243082 C17orf58Q2M2W7 97 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 Q3ZCU0 254 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 SPAG16Q8N0X2 631 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 ST6GALNAC3Q8NDV1 305 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 RAB40CQ96S21 281 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 HRH4Q9H3N8 390 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 FAM212BQ9NTI7 297 aaPredicted RBP15.33■□□□□ 0.04
HOXC11-201ENST00000243082 KALRNO60229 2985 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 NUDT19A8MXV4 375 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 S1PR2O95136 353 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 IRF2P14316 349 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 DYNLT3P51808 116 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 BLOC1S1P78537 153 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 TCTEX1D1Q8N7M0 179 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 HSD17B11Q8NBQ5 300 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 OR5C1Q8NGR4 320 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 HSD17B10Q99714 261 aaKnown RBP15.33■□□□□ 0.04
HOXC11-201ENST00000243082 SH3BGRL3Q9H299 93 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 ZNF665Q9H7R5 613 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 COA4Q9NYJ1 87 aa15.33■□□□□ 0.04
HOXC11-201ENST00000243082 ROS1P08922 2347 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 E7EQL1 145 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 TXNL1O43396 289 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 SYNGR2O43760 224 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms