RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 BEX1Q9HBH7 125 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 RNF114Q9Y508 228 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 SH2D7A6NKC9 451 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-201ENST00000230480 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 YPEL1O60688 119 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 GNB3P16520 340 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 REG1BP48304 166 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 LSM3P62310 102 aaKnown RBP10.94□□□□□ -0.66
VEGFA-201ENST00000230480 THNSL2Q86YJ6 484 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 PRR18Q8N4B5 295 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 OR56B1Q8NGI3 324 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 SUN5Q8TC36 379 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 LGALS14Q8TCE9 139 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 RITA1Q96K30 269 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 YPEL2Q96QA6 119 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 WNT10AQ9GZT5 417 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 IFI27L2Q9H2X8 130 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.94□□□□□ -0.669e-6■□□□□ 9.4
VEGFA-201ENST00000230480 PLSCR3Q9NRY6 295 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 OR1A1Q9P1Q5 309 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 NOTCH1P46531 2555 aa10.94□□□□□ -0.66
VEGFA-201ENST00000230480 IGHV1-3A0A0C4DH29 117 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 H3BUI4 141 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 SPINT2O43291 252 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 SSX5O60225 188 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 CRYZL1O95825 349 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 CRYBA1P05813 215 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 SNRNP70P08621 437 aaKnown RBP10.93□□□□□ -0.66
VEGFA-201ENST00000230480 CD3GP09693 182 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 HIST1H1DP16402 221 aaKnown RBP10.93□□□□□ -0.66
VEGFA-201ENST00000230480 MADCAM1Q13477 382 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 ZNF260Q3ZCT1 412 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 OR56B4Q8NH76 319 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 RTN4IP1Q8WWV3 396 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-201ENST00000230480 RBM14Q96PK6 669 aaKnown RBP10.93□□□□□ -0.66
VEGFA-201ENST00000230480 C6orf62Q9GZU0 229 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-201ENST00000230480 TOLLIPQ9H0E2 274 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 RANBP3Q9H6Z4 567 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-201ENST00000230480 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 ZNF230Q9UIE0 474 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-201ENST00000230480 JPT1Q9UK76 154 aa10.93□□□□□ -0.66
VEGFA-201ENST00000230480 NOTCH3Q9UM47 2321 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 IGHV3-72A0A0B4J1Y9 119 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 A0A1B0GUS0 222 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 BTBD17A6NE02 478 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 HSD17B6O14756 317 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 OR3A3P47888 321 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 NKX2-5P52952 324 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-201ENST00000230480 TRAT1Q6PIZ9 186 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 SHISA2Q6UWI4 295 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 MAFIPQ8WZ33 124 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 TOMM40LQ969M1 308 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 RAB3CQ96E17 227 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 C5orf30Q96GV9 206 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 ST6GAL2Q96JF0 529 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 GNG12Q9UBI6 72 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 TNCP24821 2201 aa10.92□□□□□ -0.66
VEGFA-201ENST00000230480 LINC01548A6NM66 108 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 OR2F2O95006 317 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 FCGR3AP08637 254 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 CEACAM3P40198 252 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 LINC00205P59089 165 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 HLA-DRB3P79483 266 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 TMEM30BQ3MIR4 351 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 CDNFQ49AH0 187 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 IGSF11Q5DX21 431 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 ZNF767PQ75MW2 155 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 IQCF2Q8IXL9 164 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 OR8H3Q8N146 312 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 SGMS2Q8NHU3 365 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 RPEQ96AT9 228 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 CREB3L1Q96BA8 519 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 GALMQ96C23 342 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 EAF1Q96JC9 268 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-201ENST00000230480 ARPC5LQ9BPX5 153 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 CMSS1Q9BQ75 279 aaKnown RBP10.91□□□□□ -0.66
VEGFA-201ENST00000230480 C11orf54Q9H0W9 315 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-201ENST00000230480 RIMS4Q9H426 269 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-201ENST00000230480 C12orf4Q9NQ89 552 aa10.91□□□□□ -0.66
VEGFA-201ENST00000230480 ADARB2-AS1A8MUL3 147 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 ST8SIA5O15466 376 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 LANCL1O43813 399 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 GAPDHP04406 335 aaKnown RBP10.9□□□□□ -0.66
VEGFA-201ENST00000230480 PTHLHP12272 177 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 IL7P13232 177 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 RAB7AP51149 207 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 SMUG1Q53HV7 270 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 TCTEX1D4Q5JR98 221 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 IDNKQ5T6J7 187 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 C11orf88Q6PI97 169 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 Q6ZS49 121 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 ZNF833PQ6ZTB9 187 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 OR10X1Q8NGY0 326 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 SLC25A33Q9BSK2 321 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 ATG5Q9H1Y0 275 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms