RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 MUC3AQ02505 3323 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 TRAV24A0A0B4J272 114 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 SYNGR1O43759 233 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 SSR4P51571 173 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 PSMF1Q92530 271 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 NCKAP5O14513 1909 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 KCNIP4Q6PIL6 250 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 LIN7CQ9NUP9 197 aaKnown RBP11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 MLNRO43193 412 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 CXCL13O43927 109 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 MBP02144 154 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 UMODP07911 640 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 IL3RAP26951 378 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 G0S2P27469 103 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 IMMP2LQ96T52 175 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 IFNL4K9M1U5 179 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 NRN1LQ496H8 165 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 OR8G2PQ6IF36 304 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 KCNE4Q8WWG9 221 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 RDH5Q92781 318 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 RBM14Q96PK6 669 aaKnown RBP11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 WDR54Q9H977 334 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 PPP1R3CQ9UQK1 317 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 WDFY4Q6ZS81 3184 aa11.84□□□□□ -0.51
SCNN1A-201ENST00000228916 HS3ST1O14792 307 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 SCGB1D1O95968 90 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 COX6A1P12074 109 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 SRD5A2P31213 254 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 YRDCQ86U90 279 aaKnown RBP11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 OR10G9Q8NGN4 311 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 OR10G7Q8NGN6 311 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 FSCN3Q9NQT6 498 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 PRDM6Q9NQX0 595 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 CD99P14209 185 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 NPPCP23582 126 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 SLC23A3Q6PIS1 610 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 OR5A2Q8NGI9 324 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 IL1F10Q8WWZ1 152 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 WFIKKN1Q96NZ8 548 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 PI4KAP42356 2102 aa11.83□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNHIT1O43257 154 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 PAGE4O60829 102 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 OR10J1P30954 320 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 ATP6V1FQ16864 119 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 DCAF10Q5QP82 559 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 MRPL21Q7Z2W9 205 aaKnown RBP11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 TMEM147Q9BVK8 224 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 DLL3Q9NYJ7 618 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 PXMP4Q9Y6I8 212 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 A0A0G2JMM0 328 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 A0A1W2PPB8 328 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 A0A1W2PRS3 328 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 KIR3DP1A8MWS1 328 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 CLDN1O95832 211 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 MRPL52Q86TS9 123 aaKnown RBP11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 OR10D3Q8NH80 312 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF488Q96MN9 340 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF576Q9H609 170 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF552Q9H707 407 aaPredicted RBP11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 LILRA1O75019 489 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 RELQ04864 619 aaPredicted RBP11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 LINC01551Q86U37 167 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 TMEM256Q8N2U0 113 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 WDYHV1Q96HA8 205 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 BTF3L4Q96K17 158 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 HSPB7Q9UBY9 170 aa11.82□□□□□ -0.52
SCNN1A-201ENST00000228916 ARHGAP21Q5T5U3 1957 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 PMS2P5A8MQ11 134 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 C1QTNF9BB2RNN3 333 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 SS18L1O75177 396 aaPredicted RBP11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 KLF7O75840 302 aaPredicted RBP11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 CHRNA7P36544 502 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 TRAPPC1Q9Y5R8 145 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 TMPRSS2O15393 492 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF16P17020 682 aaPredicted RBP11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 COX5AP20674 150 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 PPP1CBP62140 327 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 FFAR4Q5NUL3 377 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 RPS19BP1Q86WX3 136 aaKnown RBP11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 PLA2G3Q9NZ20 509 aa11.81□□□□□ -0.52
SCNN1A-201ENST00000228916 M0QZK8 103 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 NUPR1O60356 82 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 PDGFBP01127 241 aaPredicted RBP11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 CCNOP22674 350 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 EPHA8P29322 1005 aaPredicted RBP11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 MLF1P58340 268 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 FOXL1Q12952 345 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 FAM58AQ8N1B3 248 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 THOC3Q96J01 351 aaKnown RBP11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 MS4A10Q96PG2 267 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 PHF7Q9BWX1 381 aaPredicted RBP11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 C11orf94C9JXX5 98 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 MOB1BQ7L9L4 216 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms