RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
NUP88-201ENST00000225696 KCNS2Q9ULS6 477 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.48□□□□□ -0.73
NUP88-201ENST00000225696 SIRPB1O00241 398 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 BMP5P22003 454 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 CA6P23280 308 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 GALR1P47211 349 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 TAS2R60P59551 318 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 SSX2Q16385 188 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 FAM58AQ8N1B3 248 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 FGFRL1Q8N441 504 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 OR5T1Q8NG75 326 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 LSM10Q969L4 123 aaKnown RBP10.48□□□□□ -0.73
NUP88-201ENST00000225696 MRPS17Q9Y2R5 130 aaKnown RBP10.48□□□□□ -0.73
NUP88-201ENST00000225696 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 MKRN2OSH3BPM6 223 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 DVL1O14640 695 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 SS18L1O75177 396 aaPredicted RBP10.47□□□□□ -0.73
NUP88-201ENST00000225696 KBTBD11O94819 623 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 NPPCP23582 126 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 WNT5AP41221 380 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 NUBP1P53384 320 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 HBG1P69891 147 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 HBG2P69892 147 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 Q6P435 159 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 DBX2Q6ZNG2 339 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 OR5A2Q8NGI9 324 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
NUP88-201ENST00000225696 RNF150Q9ULK6 438 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 FUT9Q9Y231 359 aa10.47□□□□□ -0.73
NUP88-201ENST00000225696 RBM7Q9Y580 266 aaKnown RBP10.47□□□□□ -0.73
NUP88-201ENST00000225696 TNRC6BQ9UPQ9 1833 aaKnown RBP10.47□□□□□ -0.73
NUP88-201ENST00000225696 TRBV6-6A0A0A6YYG2 114 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 C1QTNF9BB2RNN3 333 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 CLDN1O95832 211 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 CYC1P08574 325 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 OR4A8P0C604 315 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 SELEP16581 610 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 EGR1P18146 543 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 LINC00205P59089 165 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 PMP22Q01453 160 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 PPP1R32Q7Z5V6 425 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 CENPVQ7Z7K6 275 aaPredicted RBP10.46□□□□□ -0.73
NUP88-201ENST00000225696 TGIF2LXQ8IUE1 241 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 DRAM1Q8N682 238 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 OR4F5Q8NH21 305 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 APOBEC3DQ96AK3 386 aaPredicted RBP10.46□□□□□ -0.73
NUP88-201ENST00000225696 POM121L2Q96KW2 1035 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 OR4F4Q96R69 305 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 AGMATQ9BSE5 352 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 HES7Q9BYE0 225 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 TMEM9BQ9NQ34 198 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 CLN8Q9UBY8 286 aa10.46□□□□□ -0.73
NUP88-201ENST00000225696 H7BYZ3 331 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 EREGO14944 169 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 DEGS1O15121 323 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 IFNA10P01566 189 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 COL8A2P25067 703 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 S100GP29377 79 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 FOLR3P41439 243 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 FAM3BP58499 235 aaPredicted RBP10.46□□□□□ -0.74
NUP88-201ENST00000225696 TFF3Q07654 80 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 SPINK9Q5DT21 86 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 TMEM14EPQ6UXP3 125 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 WDR86Q86TI4 376 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 C5orf30Q96GV9 206 aa10.46□□□□□ -0.74
NUP88-201ENST00000225696 ACTR3CQ9C0K3 210 aaPredicted RBP10.46□□□□□ -0.74
NUP88-201ENST00000225696 RIMS4Q9H426 269 aaPredicted RBP10.46□□□□□ -0.74
NUP88-201ENST00000225696 PPP5D1E7EU14 171 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 TGOLN2O43493 480 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 KRASP01116 189 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 FGF7P21781 194 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 G6PCP35575 357 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 CEACAM6P40199 344 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 CXCL12P48061 93 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 RPL30P62888 115 aaKnown RBP10.45□□□□□ -0.74
NUP88-201ENST00000225696 Q3ZCU0 254 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 COA6Q5JTJ3 125 aaKnown RBP10.45□□□□□ -0.74
NUP88-201ENST00000225696 LYSMD4Q5XG99 296 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 ZDHHC16Q969W1 377 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 GUCD1Q96NT3 240 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 ATG101Q9BSB4 218 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 PATE3B3GLJ2 98 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 PAGE4O60829 102 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 CEBPDP49716 269 aaPredicted RBP10.45□□□□□ -0.74
NUP88-201ENST00000225696 BRWD1-AS2P59051 145 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 TNFRSF9Q07011 255 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 USF2Q15853 346 aaPredicted RBP10.45□□□□□ -0.74
NUP88-201ENST00000225696 C3AR1Q16581 482 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 ACSF3Q4G176 576 aaPredicted RBP10.45□□□□□ -0.74
NUP88-201ENST00000225696 OR1L1Q8NH94 360 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 RAB24Q969Q5 203 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 TMEM45BQ96B21 275 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 PINX1Q96BK5 328 aaKnown RBP10.45□□□□□ -0.74
NUP88-201ENST00000225696 C2orf88Q9BSF0 95 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 OR51I2Q9H344 312 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 TRAPPC2LQ9UL33 140 aa10.45□□□□□ -0.74
NUP88-201ENST00000225696 PRR14LQ5THK1 2151 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 OR2H2O95918 312 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms