RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SIPA1L1O43166 1804 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 TUSC1Q2TAM9 212 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 RHOVQ96L33 236 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 RBM38Q9H0Z9 239 aaKnown RBP15.84■□□□□ 0.13
CLIP2-201ENST00000223398 ZIC3O60481 467 aa15.83■□□□□ 0.13
CLIP2-201ENST00000223398 MRPL14Q6P1L8 145 aaKnown RBP15.83■□□□□ 0.13
CLIP2-201ENST00000223398 CDKN1AP38936 164 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 TMEM18Q96B42 140 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 IMMP1LQ96LU5 166 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 PKIBQ9C010 78 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 CDS2O95674 445 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 REG1AP05451 166 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 HIST1H3AP68431 136 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 CENPVQ7Z7K6 275 aaPredicted RBP15.83■□□□□ 0.12
CLIP2-201ENST00000223398 RALYQ9UKM9 306 aaKnown RBP15.83■□□□□ 0.12
CLIP2-201ENST00000223398 YTHDF2Q9Y5A9 579 aaKnown RBP15.83■□□□□ 0.12
CLIP2-201ENST00000223398 DHRS7CA6NNS2 312 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 CEACAM18A8MTB9 384 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 PAGE4O60829 102 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 LIPFP07098 398 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 SPCS3P61009 180 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 RPL8P62917 257 aaKnown RBP15.83■□□□□ 0.12
CLIP2-201ENST00000223398 ANKRD55Q3KP44 614 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF645Q8N7E2 425 aa15.83■□□□□ 0.12
CLIP2-201ENST00000223398 RBFOX3A6NFN3 312 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 SUMO1P63165 101 aaKnown RBP15.82■□□□□ 0.12
CLIP2-201ENST00000223398 UBE2V2Q15819 145 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 C9orf106Q8NAJ2 232 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 P01737 135 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 IFI6P09912 130 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 MESP1Q9BRJ9 268 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 TGOLN2O43493 480 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 HIST1H1EP10412 219 aaKnown RBP15.82■□□□□ 0.12
CLIP2-201ENST00000223398 CEBPEQ15744 281 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 AURKAIP1Q9NWT8 199 aaPredicted RBP15.82■□□□□ 0.12
CLIP2-201ENST00000223398 PITPNC1Q9UKF7 332 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 TRBV5-5A0A0J9YX44 114 aa15.82■□□□□ 0.12
CLIP2-201ENST00000223398 KIF13BQ9NQT8 1826 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 FOXH1O75593 365 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 RD3LP0DJH9 198 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 COX5BP10606 129 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF708P17019 499 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 PCSK4Q6UW60 755 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF426Q9BUY5 554 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 CLDN34H7C241 214 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 CDK2AP1O14519 115 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 HYPMO75409 117 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 OR10J1P30954 320 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF107Q9UII5 783 aaPredicted RBP15.81■□□□□ 0.12
CLIP2-201ENST00000223398 NCOR1O75376 2440 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 hCG_38984A0A1B0GV85 526 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 OR5AL1P0C617 328 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 PTX4Q96A99 478 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 C16orf92Q96LL3 132 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 AICDAQ9GZX7 198 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 G6PC2Q9NQR9 355 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 NUBP1P53384 320 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 CLEC7AQ9BXN2 247 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 MANBALQ9NQG1 85 aa15.81■□□□□ 0.12
CLIP2-201ENST00000223398 ZFC3H1O60293 1989 aaKnown RBP15.8■□□□□ 0.12
CLIP2-201ENST00000223398 IGHV3-35A0A0C4DH35 117 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 KLF4O43474 513 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 MBPP02686 304 aaPredicted RBP15.8■□□□□ 0.12
CLIP2-201ENST00000223398 ISG15P05161 165 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 SSTR5P35346 364 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 KHDC3LQ587J8 217 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 EBLN2Q6P2I7 272 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 PRNTQ86SH4 94 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 MMD2Q8IY49 270 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 STXBP6Q8NFX7 210 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 TMEM106BQ9NUM4 274 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 PLA2G10O15496 165 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 GLRXP35754 106 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 NHLH1Q02575 133 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 NHLH2Q02577 135 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 TMEM255AQ5JRV8 349 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 VKORC1L1Q8N0U8 176 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 ELF5Q9UKW6 265 aaPredicted RBP15.8■□□□□ 0.12
CLIP2-201ENST00000223398 CD1BP29016 333 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 TM4SF20Q53R12 229 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 CLLU1Q5K131 121 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF561Q8N587 486 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 OR9G1Q8NH87 305 aa15.8■□□□□ 0.12
CLIP2-201ENST00000223398 OR2T8A6NH00 312 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 LOC285556D6RIA3 1793 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 IGKV3D-15A0A087WSY6 115 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 SRSF10O75494 262 aaKnown RBP15.79■□□□□ 0.12
CLIP2-201ENST00000223398 IGKV3-15P01624 115 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 PF4P02776 101 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF79Q15937 498 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 SNRNP40Q96DI7 357 aaKnown RBP15.79■□□□□ 0.12
CLIP2-201ENST00000223398 NEURL2Q9BR09 285 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 C10orf128Q5T292 105 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 FAM168AQ92567 244 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 MEGF10Q96KG7 1140 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 METTL26Q96S19 204 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 PIKFYVEQ9Y2I7 2098 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 RTTNQ86VV8 2226 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 SLC35E3Q7Z769 313 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 CALHM1Q8IU99 346 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms