RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 MYBPHQ13203 477 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 SLAQ13239 276 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 ZNF787Q6DD87 383 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 OR52M1Q8NGK5 317 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 EMC6Q9BV81 110 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 ALKBH4Q9NXW9 302 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 SDK2Q58EX2 2172 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 C19orf67A6NJJ6 358 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 TRAF3IP2O43734 574 aaPredicted RBP11.66□□□□□ -0.54
GABPB1-201ENST00000220429 KBTBD11O94819 623 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 RAC3P60763 192 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 RAET1LQ5VY80 246 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 COMMD2Q86X83 199 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 SIGLECL1Q8N7X8 197 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 ST6GALNAC3Q8NDV1 305 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 DEFB126Q9BYW3 111 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 R4GMQ9 66 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 CNTRLQ7Z7A1 2325 aa11.65□□□□□ -0.54
GABPB1-201ENST00000220429 FREM2Q5SZK8 3169 aa11.65□□□□□ -0.54
GABPB1-201ENST00000220429 CRYM-AS1A6NIL9 109 aa11.65□□□□□ -0.54
GABPB1-201ENST00000220429 MUC15Q8N387 334 aa11.65□□□□□ -0.54
GABPB1-201ENST00000220429 OR2M3Q8NG83 312 aa11.65□□□□□ -0.54
GABPB1-201ENST00000220429 EMC9Q9Y3B6 208 aa11.65□□□□□ -0.54
GABPB1-201ENST00000220429 PPIAL4EA0A075B759 164 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 PPIAL4CA0A0B4J2A2 164 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 DUXBA0A1W2PPF3 345 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 IGSF23A1L1A6 192 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 PPIAL4DF5H284 164 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 CELA2AP08217 269 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 PPIAL4FP0DN26 164 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 DUSP1P28562 367 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 OTX1P32242 354 aaPredicted RBP11.65□□□□□ -0.55
GABPB1-201ENST00000220429 CSNK2A1P68400 391 aaPredicted RBP11.65□□□□□ -0.55
GABPB1-201ENST00000220429 ARG2P78540 354 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 PCOLCEQ15113 449 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 FAM78BQ5VT40 261 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 CSNK2A3Q8NEV1 391 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 SPACA9Q96E40 222 aaPredicted RBP11.65□□□□□ -0.55
GABPB1-201ENST00000220429 RSG1Q9BU20 258 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.55
GABPB1-201ENST00000220429 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 LOC101059948A0A1B0GTJ6 334 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 TAS2R46P59540 309 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 PLAC9Q5JTB6 97 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 LYZL2Q7Z4W2 148 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 VASH2Q86V25 355 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 ZIC4Q8N9L1 334 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 OR4F17Q8NGA8 305 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 OR5C1Q8NGR4 320 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 FAM222BQ8WU58 562 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
GABPB1-201ENST00000220429 LRFN3Q9BTN0 628 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 KLHL13Q9P2N7 655 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 A0A1W2PNR3 127 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 IL11RAQ14626 422 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 LCN15Q6UWW0 184 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 TMEM144Q7Z5S9 345 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 PLA2G3Q9NZ20 509 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 ABI3Q9P2A4 366 aa11.64□□□□□ -0.55
GABPB1-201ENST00000220429 NCOA6Q14686 2063 aaPredicted RBP11.63□□□□□ -0.55
GABPB1-201ENST00000220429 SLC25A17O43808 307 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 MT-CO2P00403 227 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 HIST1H1DP16402 221 aaKnown RBP11.63□□□□□ -0.55
GABPB1-201ENST00000220429 CRISP2P16562 243 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 CEACAM3P40198 252 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 RAB9AP51151 201 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 SP6Q3SY56 376 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 MRGPRGQ86SM5 289 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 WDR54Q9H977 334 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 CHCHD2Q9Y6H1 151 aaPredicted RBP11.63□□□□□ -0.55
GABPB1-201ENST00000220429 LOC102723996A0A087X1L8 192 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 LOC107986453A0A1B0GWG9 222 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 RAD51DO75771 328 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 CYC1P08574 325 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 CCL4P13236 92 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 SNU13P55769 128 aaKnown RBP11.63□□□□□ -0.55
GABPB1-201ENST00000220429 CLDN15P56746 228 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 EXT1Q16394 746 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 PEAR1Q5VY43 1037 aaPredicted RBP11.63□□□□□ -0.55
GABPB1-201ENST00000220429 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 BAGE2Q86Y30 109 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 HHLA2Q9UM44 414 aa11.63□□□□□ -0.55
GABPB1-201ENST00000220429 NTN3O00634 580 aaPredicted RBP11.62□□□□□ -0.55
GABPB1-201ENST00000220429 RAB29O14966 203 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 SOCS1O15524 211 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 LMX1BO60663 402 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 GFRA1P56159 465 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 MRPS34P82930 218 aaKnown RBP11.62□□□□□ -0.55
GABPB1-201ENST00000220429 ARFRP1Q13795 201 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 KIAA2026Q5HYC2 2103 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 FADS6Q8N9I5 356 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 OR2Y1Q8NGV0 311 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 RNF133Q8WVZ7 376 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 REPIN1Q9BWE0 567 aaKnown RBP11.62□□□□□ -0.55
GABPB1-201ENST00000220429 PLEKHF2Q9H8W4 249 aa11.62□□□□□ -0.55
GABPB1-201ENST00000220429 ZDHHC11Q9H8X9 412 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms