RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HTR1DP28221 377 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 RAB7AP51149 207 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 HERV-K104P61576 105 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 SCGB2B2Q4G0G5 96 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 MIDNQ504T8 468 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 DHRS11Q6UWP2 260 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 TMEM17Q86X19 198 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 LDLRAD3Q86YD5 345 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 ARRDC1Q8N5I2 433 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 AGMATQ9BSE5 352 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 OR2D2Q9H210 308 aa22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 AMMECR1Q9Y4X0 333 aaPredicted RBP22.11■■□□□ 1.13
CHMP4B-201ENST00000217402 ITGB1BP1O14713 200 aa22.1■■□□□ 1.13
CHMP4B-201ENST00000217402 FAUP35544 74 aaKnown RBP22.1■■□□□ 1.13
CHMP4B-201ENST00000217402 LUMP51884 338 aaPredicted RBP22.1■■□□□ 1.13
CHMP4B-201ENST00000217402 BEX2Q9BXY8 128 aa22.1■■□□□ 1.13
CHMP4B-201ENST00000217402 MS4A7Q9GZW8 240 aaPredicted RBP22.1■■□□□ 1.13
CHMP4B-201ENST00000217402 DISC1C4P0D8 188 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 ZNF735P0CB33 412 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 PAX6P26367 422 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 TOMM40LQ969M1 308 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 A0A0U1RQK1 487 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 BCL6BQ8N143 479 aaPredicted RBP22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 OR51S1Q8NGJ8 323 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 SECTM1Q8WVN6 248 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 DPM3Q9P2X0 92 aa22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 TBL2Q9Y4P3 447 aaKnown RBP22.09■■□□□ 1.13
CHMP4B-201ENST00000217402 SAA2-SAA4A0A096LPE2 208 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 SAA2P0DJI9 122 aaPredicted RBP22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 IL3RAP26951 378 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 GPR12P47775 334 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 IFITM3Q01628 133 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 DIAPH2-AS1Q14236 149 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 ODF3L1Q8IXM7 274 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 CREB3L1Q96BA8 519 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 MOB3AQ96BX8 217 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 FXYD6Q9H0Q3 95 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 ZNF221Q9UK13 617 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 CDC42EP3Q9UKI2 254 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 HILPDAQ9Y5L2 63 aa22.08■■□□□ 1.13
CHMP4B-201ENST00000217402 OR5H14A6NHG9 310 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 LEUTXA8MZ59 168 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 REG1BP48304 166 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 BPIFB3P59826 476 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 RPL39P5Q59GN2 51 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 MINOS1Q5TGZ0 78 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 AJUBAQ96IF1 538 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 MINOS1-NBL1R4GNA1 71 aa22.07■■□□□ 1.12
CHMP4B-201ENST00000217402 CEACAM3P40198 252 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 SSX2Q16385 188 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 TPTE2P1Q5T6R2 138 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 AADACL3Q5VUY0 350 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 DEDD2Q8WXF8 326 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 RPEQ96AT9 228 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 PIPOXQ9P0Z9 390 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 FAM96BQ9Y3D0 163 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 LY6LH3BQJ8 138 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 RAB29O14966 203 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 C16orf87Q6PH81 154 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 DYNAPQ8N1N2 210 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 BORCS5Q969J3 196 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 PRRT1Q99946 306 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 SLC5A7Q9GZV3 580 aa22.06■■□□□ 1.12
CHMP4B-201ENST00000217402 HSD17B6O14756 317 aa22.05■■□□□ 1.12
CHMP4B-201ENST00000217402 PLA2G10O15496 165 aa22.05■■□□□ 1.12
CHMP4B-201ENST00000217402 PLA1AQ53H76 456 aa22.05■■□□□ 1.12
CHMP4B-201ENST00000217402 IDO2Q6ZQW0 420 aa22.05■■□□□ 1.12
CHMP4B-201ENST00000217402 LHFPL1Q86WI0 220 aa22.05■■□□□ 1.12
CHMP4B-201ENST00000217402 ST6GALNAC6Q969X2 333 aa22.05■■□□□ 1.12
CHMP4B-201ENST00000217402 ANK3Q12955 4377 aaKnown RBP22.05■■□□□ 1.12
CHMP4B-201ENST00000217402 MDFIC2A0A1B0GVS7 189 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 CENPXA8MT69 81 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 SRD5A1P18405 259 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 BAMBIQ13145 260 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 C9orf139Q6ZV77 190 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 ZNF645Q8N7E2 425 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 TERB2Q8NHR7 220 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 FAM216AQ8WUB2 273 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 C5orf30Q96GV9 206 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 CCL28Q9NRJ3 127 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 SCP2D1Q9UJQ7 156 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 TBC1D24Q9ULP9 559 aa22.04■■□□□ 1.12
CHMP4B-201ENST00000217402 NSD1Q96L73 2696 aaPredicted RBP22.03■■□□□ 1.12
CHMP4B-201ENST00000217402 MTORP42345 2549 aa22.03■■□□□ 1.12
CHMP4B-201ENST00000217402 ZNF137PP52743 207 aa22.03■■□□□ 1.12
CHMP4B-201ENST00000217402 MALSU1Q96EH3 234 aa22.03■■□□□ 1.12
CHMP4B-201ENST00000217402 SDHAF2Q9NX18 166 aa22.03■■□□□ 1.12
CHMP4B-201ENST00000217402 SLC2A8Q9NY64 477 aa22.03■■□□□ 1.12
CHMP4B-201ENST00000217402 NAV3Q8IVL0 2385 aa22.03■■□□□ 1.12
CHMP4B-201ENST00000217402 LYRM1O43325 122 aa22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 DEFB112Q30KQ8 113 aa22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 ZNF833PQ6ZTB9 187 aa22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 MRGPRFQ96AM1 343 aa22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 S1PR3Q99500 378 aa22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 ZNF251Q9BRH9 671 aa22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 C7orf50Q9BRJ6 194 aaKnown RBP22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 GHITMQ9H3K2 345 aa22.02■■□□□ 1.12
CHMP4B-201ENST00000217402 NAP1L6A6NFF2 107 aa22.02■■□□□ 1.11
CHMP4B-201ENST00000217402 FBP1P09467 338 aa22.02■■□□□ 1.11
CHMP4B-201ENST00000217402 PGAM2P15259 253 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms