RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 MALP21145 153 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 SYT11Q9BT88 431 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 SLIRPQ9GZT3 109 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 SLC25A10Q9UBX3 287 aaPredicted RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 A0A1B0GTH9 108 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 TCRBV5S2A0A599 114 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 GPX1P07203 203 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 ACVR1Q04771 509 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 ZNF600Q6ZNG1 722 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 ANKRD33Q7Z3H0 272 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 SPCS1Q9Y6A9 102 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 ARAP2Q8WZ64 1704 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 CDIPTO14735 213 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 KLHDC9Q8NEP7 349 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 CXCL3P19876 107 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 LAMTOR1Q6IAA8 161 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 TOMM7Q9P0U1 55 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 RCC1P18754 421 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 RAG2P55895 527 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 TMEM249Q2WGJ8 235 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 CCDC144NLQ6NUI1 221 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 PQLC2Q6ZP29 291 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 BCL2L10Q9HD36 194 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 SLC52A3Q9NQ40 469 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 TNFSF10P50591 281 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 ANKRD20A5PA0PJZ0 165 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 HEXA-AS1Q9H8Q6 139 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 PXMP4Q9Y6I8 212 aa12.81□□□□□ -0.36
SPTLC2-201ENST00000216484 APOMO95445 188 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 A0A0A6YYD5 115 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 ST6GALNAC3Q8NDV1 305 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 SOCS1O15524 211 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 AGFG2O95081 481 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 MMP16P51512 607 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 OR10S1Q8NGN2 331 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 MRGPRX3Q96LB0 322 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 FIZ1Q96SL8 496 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 IL20Q9NYY1 176 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 PLPP3O14495 311 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 KCNE5Q9UJ90 142 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 SIGLEC7Q9Y286 467 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 RIMKLAQ8IXN7 391 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 CNTFRP26992 372 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 SLC25A53Q5H9E4 307 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 OR2K2Q8NGT1 345 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 ANAPC13Q9BS18 74 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 VCX2Q9H322 139 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 FSCN3Q9NQT6 498 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 CCL27Q9Y4X3 112 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 A1L4Q6 167 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 SAA1P0DJI8 122 aaPredicted RBP12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 PDLIM7Q9NR12 457 aa12.8□□□□□ -0.36
SPTLC2-201ENST00000216484 PRICKLE4Q2TBC4 344 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 PTOV1Q86YD1 416 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 ABHD1Q96SE0 405 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 FAM106CPP0CH98 169 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 GALP22466 123 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 DDTP30046 118 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 FXYD3Q14802 87 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 NPVFQ9HCQ7 196 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 TNCP24821 2201 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 EML2O95834 649 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 CYB5R3P00387 301 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 MARVELD3Q96A59 401 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 DERL1Q9BUN8 251 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 METTL1Q9UBP6 276 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 K7N7A8 449 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 OVCH2Q7RTZ1 564 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 RAX2Q96IS3 184 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 CBLN4Q9NTU7 201 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 COX11Q9Y6N1 276 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 PRF1P14222 555 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 EIF3IQ13347 325 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 SSPNQ14714 243 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 CCL28Q9NRJ3 127 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 IL11RAQ14626 422 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 KCNK7Q9Y2U2 307 aa12.79□□□□□ -0.36
SPTLC2-201ENST00000216484 LAMB2P55268 1798 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 HLA-DQA1P01909 254 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 RPL31P62899 125 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 H1FOOQ8IZA3 346 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 NDUFS8O00217 210 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 DEFB123Q8N688 67 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 RARRES2Q99969 163 aa12.78□□□□□ -0.36
SPTLC2-201ENST00000216484 PRRT4C9JH25 899 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms