RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 Q8WTZ3 238 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 THYN1Q9P016 225 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 J3QT63 122 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF207O43670 478 aaKnown RBP11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 HKR1P10072 659 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 LOXL3P58215 753 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 OR2T8A6NH00 312 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 RELBQ01201 579 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 TEX30Q5JUR7 227 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 PERPQ96FX8 193 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 SELENOKQ9Y6D0 94 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 RGPD4Q7Z3J3 1758 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 M0R3E3 92 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF385CQ66K41 422 aaPredicted RBP11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 TMEM211Q6ICI0 200 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 DYNLRB2Q8TF09 96 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 APOBEC4Q8WW27 367 aaKnown RBP11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 CLDN18P56856 261 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 H2BFSP57053 126 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 NUDT16L1Q9BRJ7 211 aaKnown RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 REPIN1Q9BWE0 567 aaKnown RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 KNTC1P50748 2209 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 WISP3O95389 354 aaPredicted RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 PGA5P0DJD9 388 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 UCP2P55851 309 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 ERASQ7Z444 233 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 SMRP1Q8NCR6 262 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF501Q96CX3 271 aaPredicted RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 PPP1R3EQ9H7J1 279 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 SIRT7Q9NRC8 400 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 LYRM2Q9NU23 88 aaPredicted RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 METTL1Q9UBP6 276 aaKnown RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 HIGD1AQ9Y241 93 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 CEACAM18A8MTB9 384 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 SNCGO76070 127 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 OR1N2Q8NGR9 330 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 SF3B5Q9BWJ5 86 aaKnown RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 UNC13CQ8NB66 2214 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 LINC00862A6NCI5 91 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 B4DEV8 164 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 SCAND1P57086 179 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 RIGQ13278 110 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 PMS2CLQ68D20 193 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 DOLPP1Q86YN1 238 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 MYOZ3Q8TDC0 251 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 SCN8AQ9UQD0 1980 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 LIMS1P48059 325 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 HOXA4Q00056 320 aaPredicted RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF660Q6AZW8 331 aaPredicted RBP11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
TGFBR3-201ENST00000212355 IGHV3OR16-8A0A075B7F1 116 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 TMEM229AB2RXF0 380 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 PDE6DO43924 150 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 GDF9O60383 454 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 ZG16O60844 167 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 MRGPRGQ86SM5 289 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 SLC25A38Q96DW6 304 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 TLNRD1Q9H1K6 362 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 RP1P56715 2156 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 CORTO00230 105 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 TMEM127O75204 238 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 TIAF1O95411 115 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 MFSD2BA6NFX1 497 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 P2RY4P51582 365 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 UNC119Q13432 240 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 A0A1B0GU03 582 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 EIF4E3Q8N5X7 224 aaKnown RBP11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 ELOA3CA0A087WX78 387 aaPredicted RBP11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 TSPAN2O60636 221 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 TFF1P04155 84 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 ARL14EPLP0DKL9 152 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 BPIFA4PQ86YQ2 179 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 SHANK3Q9BYB0 1731 aa11.74□□□□□ -0.53
TGFBR3-201ENST00000212355 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 ZNF441Q8N8Z8 693 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PIN1P1O15428 100 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 SOD3P08294 240 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 FCGR2BP31994 310 aaPredicted RBP11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 SSBP3Q9BWW4 388 aaPredicted RBP11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 WNT9BO14905 357 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 CA2P00918 260 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 CD74P04233 296 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 IFITM2Q01629 132 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 FAM201AQ5SY85 155 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 SLC25A45Q8N413 288 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 LHFPL6Q9Y693 200 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PPIAL4EA0A075B759 164 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PPIAL4DF5H284 164 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PGLYRP1O75594 196 aaPredicted RBP11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 PPIAL4FP0DN26 164 aa11.73□□□□□ -0.53
TGFBR3-201ENST00000212355 ROM1Q03395 351 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms