RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 DRAM1Q8N682 238 aa11.86□□□□□ -0.51
USH1C-201ENST00000005226 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
USH1C-201ENST00000005226 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 CYC1P08574 325 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 GZMBP10144 247 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 G6PCP35575 357 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 ZNF816Q0VGE8 651 aaPredicted RBP11.85□□□□□ -0.51
USH1C-201ENST00000005226 BSXQ3C1V8 233 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 Q6P435 159 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 ZNF66Q6ZN08 573 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
USH1C-201ENST00000005226 OR4F5Q8NH21 305 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 PITPNC1Q9UKF7 332 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 PILRBQ9UKJ0 227 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 TRIOBPQ9H2D6 2365 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 GALR1P47211 349 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 MEF2BQ02080 365 aaPredicted RBP11.85□□□□□ -0.51
USH1C-201ENST00000005226 GTF3AQ92664 365 aaKnown RBP11.85□□□□□ -0.51
USH1C-201ENST00000005226 MISP3Q96FF7 219 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 PSMG3Q9BT73 122 aaPredicted RBP11.85□□□□□ -0.51
USH1C-201ENST00000005226 RIMS4Q9H426 269 aaPredicted RBP11.85□□□□□ -0.51
USH1C-201ENST00000005226 TMEM9BQ9NQ34 198 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 NAT8Q9UHE5 227 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 PCSK5Q92824 1860 aa11.85□□□□□ -0.51
USH1C-201ENST00000005226 TSTD3H0UI37 97 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 OR2H2O95918 312 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 MAGEA5P43359 124 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 LHX2P50458 406 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 GNG3P63215 75 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 TFF3Q07654 80 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 WDR86Q86TI4 376 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 LSM10Q969L4 123 aaKnown RBP11.84□□□□□ -0.51
USH1C-201ENST00000005226 PARLQ9H300 379 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 SIT1Q9Y3P8 196 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 MT-CO3P00414 261 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 SLC25A6P12236 298 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 SERF2P84101 59 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 ALKBH6Q3KRA9 238 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 ZNF573Q86YE8 665 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 TMEM183AQ8IXX5 376 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 ZNF664Q8N3J9 261 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 OR1P1Q8NH06 330 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 ZDHHC16Q969W1 377 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 TMEM45BQ96B21 275 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 THOC3Q96J01 351 aaKnown RBP11.84□□□□□ -0.51
USH1C-201ENST00000005226 P2RX4Q99571 388 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 SRD5A3Q9H8P0 318 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 PRR14LQ5THK1 2151 aa11.84□□□□□ -0.51
USH1C-201ENST00000005226 DSPP15924 2871 aaKnown RBP11.83□□□□□ -0.52
USH1C-201ENST00000005226 H7BYZ3 331 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
USH1C-201ENST00000005226 CLDN18P56856 261 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
USH1C-201ENST00000005226 TDHQ8IZJ6 230 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 OR51G1Q8NGK1 321 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 OR51I2Q9H344 312 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 FUT9Q9Y231 359 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 C1QTNF9BB2RNN3 333 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 NTN3O00634 580 aaPredicted RBP11.83□□□□□ -0.52
USH1C-201ENST00000005226 PAGE4O60829 102 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 IFNA1P01562 189 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 CHRNA7P36544 502 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 FAM3BP58499 235 aaPredicted RBP11.83□□□□□ -0.52
USH1C-201ENST00000005226 BTNL3Q6UXE8 466 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 OR1L1Q8NH94 360 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 CT55Q8WUE5 264 aa11.83□□□□□ -0.52
USH1C-201ENST00000005226 TRBV6-6A0A0A6YYG2 114 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 CDIPTO14735 213 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 KBTBD11O94819 623 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 CRYAAP02489 173 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 COL8A2P25067 703 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 PLP2Q04941 152 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 JOSD1Q15040 202 aaPredicted RBP11.82□□□□□ -0.52
USH1C-201ENST00000005226 CYP2G1PQ6ZSU1 146 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 TMEM105Q8N8V8 129 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 APH1AQ96BI3 265 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 CTDSP1Q9GZU7 261 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 A0A1B0GUS0 222 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 SS18L1O75177 396 aaPredicted RBP11.82□□□□□ -0.52
USH1C-201ENST00000005226 IDH3GP51553 393 aaPredicted RBP11.82□□□□□ -0.52
USH1C-201ENST00000005226 GNB2P62879 340 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 LINC00696Q6ZRV3 163 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 OR2M7Q8NG81 312 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
USH1C-201ENST00000005226 IGKV3D-15A0A087WSY6 115 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 ZG16O60844 167 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 GRPP07492 148 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 CELA3BP08861 270 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 FGF7P21781 194 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 NPPCP23582 126 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 PSMB3P49720 205 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 FFAR4Q5NUL3 377 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 PMS2CLQ68D20 193 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 TMPRSS7Q7RTY8 843 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms