RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ms4a4cQ9D3F6 226 aa6.01□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Arpc1bQ9WV32 372 aaKnown RBP6.01□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Nckap5E9QAE1 1909 aa6.01□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc25a53A2AF28 346 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr231E9Q0M4 307 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 CatsperdE9Q9F6 805 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm14288E9Q9W0 88 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Hsd17b12O70503 312 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Hbb-yP02104 147 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 GzmdP11033 252 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Prph2P15499 346 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmem171Q4KL18 322 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr113Q8VEU4 312 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1449Q8VEV8 314 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1254Q8VFB1 314 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc35b3Q922Q5 369 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Mrps24Q9CQV5 167 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Cmtm2aQ9DAR1 169 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm26992S4R1A3 76 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Scml2B1AVB3 969 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Nr1h5E9Q5A6 505 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Zfp820E9Q5G8 549 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1348F6VB59 318 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Mex3aG3UYU0 520 aaKnown RBP6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Prrt1O35449 306 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 C1ql1O88992 258 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Hsd17b8P50171 259 aaKnown RBP6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Bglap3P54615 95 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Polr2gP62488 172 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Col8a1Q00780 744 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Spin2cQ6NVE3 257 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1282Q7TQY5 305 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc5a7Q8BGY9 580 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Ndrg4Q8BTG7 352 aaKnown RBP6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Zfp459Q8BZ17 267 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr401Q8VFX6 315 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r51Q8VIC6 319 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Yif1aQ91XB7 293 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Letmd1Q924L1 360 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr894Q9EQB2 313 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Arhgef17Q80U35 2057 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1532-ps1A0A0R4J8U2 307 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm4950D3YUM8 205 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr872E9PVW2 323 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Zfp708F8VPP0 541 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc38a6G3UVW3 457 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr707K7N662 307 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm8265K7N6Y8 158 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr597L7N224 315 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Ptbp1P17225 527 aaKnown RBP6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Pax6P63015 422 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 UngP97931 306 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Q6DIA7 600 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1286Q7TQY2 305 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc25a41Q8BVN7 312 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Scnm1Q8K136 229 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r74Q8R290 304 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tctn3Q8R2Q6 595 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 RhovQ8VDU1 236 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1450Q8VF19 325 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Mdp1Q9D967 164 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Abhd5Q9DBL9 351 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Hsd17b11Q9EQ06 298 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Nox4Q9JHI8 578 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Trex2Q9R1A9 236 aa6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Eif3gQ9Z1D1 320 aaKnown RBP6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tns1E9Q0S6 1888 aaKnown RBP6□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr721-ps1A0A140T8T9 324 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm14409A2ARR8 349 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r5B2RQT2 315 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r137D3YTY1 307 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r143E9PUW9 307 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r157E9Q069 297 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r139E9Q8L6 297 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Lipo5F6QKH6 233 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r112G3UY48 297 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r135K9J7G0 307 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r125L7N227 307 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r116L7N2A6 307 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Dusp1P28563 367 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Mas1P30554 324 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Pla2g2cP48076 150 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Pcbd1P61458 104 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Rab11aP62492 216 aaKnown RBP5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gpr160Q3U3F9 336 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr151Q60893 309 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Hes3Q61657 175 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr804Q7TRH7 314 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmem106cQ80VP8 260 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 IqcjQ8BPW0 110 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc22a29Q8BWG6 551 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm16503Q8C6M9 103 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Rdh10Q8VCH7 341 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Sf3b5Q923D4 86 aaKnown RBP5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Abcg5Q99PE8 652 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmem128Q9CZB9 163 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Arrdc2Q9D668 407 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Lurap1Q9D6I9 239 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Keg1Q9DCY0 295 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn1r100Q9EPS5 307 aa5.99□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms