RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ELANEP08246 267 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 UBBP0CG47 229 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 CNTFRP26992 372 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 HTR2CP28335 458 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 OR3A3P47888 321 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 CDX1P47902 265 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-211ENST00000641009 RPS27AP62979 156 aaKnown RBP10.89□□□□□ -0.67
LINC00339-211ENST00000641009 UNC119Q13432 240 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 SPHARQ15513 63 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 MED22Q15528 200 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 HMGN3Q15651 99 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 C1orf100Q5SVJ3 147 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 RNLSQ5VYX0 342 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 C11orf87Q6NUJ2 197 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 CEACAM19Q7Z692 300 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 RNF152Q8N8N0 203 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 GALMQ96C23 342 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 KCTD7Q96MP8 289 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 YPEL2Q96QA6 119 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 NABP2Q9BQ15 211 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 TMEM59Q9BXS4 323 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 VCXQ9H320 206 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 ZNF107Q9UII5 783 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-211ENST00000641009 SAA2-SAA4A0A096LPE2 208 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 IGF1P05019 195 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 SAA2P0DJI9 122 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-211ENST00000641009 SRMP19623 302 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 ACTBP60709 375 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 OR8U1Q8NH10 309 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 IL1F10Q8WWZ1 152 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 PHYHIPQ92561 330 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 KMT2CQ8NEZ4 4911 aaKnown RBP10.88□□□□□ -0.67
LINC00339-211ENST00000641009 SORL1Q92673 2214 aa10.88□□□□□ -0.67
LINC00339-211ENST00000641009 A0A0A6YYD4 124 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 SLC22A1O15245 554 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 RGS11O94810 467 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 PSMB8P28062 276 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 LUMP51884 338 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-211ENST00000641009 QRFPP83859 136 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 KIR2DS1Q14954 304 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 HSD17B12Q53GQ0 312 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 VAX1Q5SQQ9 334 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 ZNF833PQ6ZTB9 187 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 OR2AK2Q8NG84 335 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 KCNG3Q8TAE7 436 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 TM2D1Q9BX74 207 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 NKX1-2Q9UD57 310 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-211ENST00000641009 WSB1Q9Y6I7 421 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 TMEM14DPA8MWL7 114 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 G3V318 75 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 ATP6V0E1O15342 81 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 NAPSAO96009 420 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 UCHL1P09936 223 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 BLVRBP30043 206 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-211ENST00000641009 CD69Q07108 199 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 LY6G6FQ5SQ64 297 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 LIPKQ5VXJ0 399 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 SVOPQ8N4V2 548 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 OR5M8Q8NGP6 311 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 SETD6Q8TBK2 473 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 C4orf3Q8WVX3 66 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 ZNF251Q9BRH9 671 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 ANKRD60Q9BZ19 345 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 IFI27L2Q9H2X8 130 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 CHMP1AQ9HD42 196 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-211ENST00000641009 SCN3BQ9NY72 215 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 ABRACLQ9P1F3 81 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 ZNF580Q9UK33 172 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 LRRC42Q9Y546 428 aa10.87□□□□□ -0.67
LINC00339-211ENST00000641009 IGHV7-81A0A0B4J1V7 117 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 NBR2O15453 112 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 SOCS1O15524 211 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 HLA-DRB1P01911 266 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 OR5H8P0DN80 308 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 CD37P11049 281 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 AQP4P55087 323 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 DGCR2P98153 550 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 IRF3Q14653 427 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 P2RY14Q15391 338 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 ZNF880Q6PDB4 577 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 OR6M1Q8NGM8 313 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 NRG4Q8WWG1 115 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 UFD1Q92890 307 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 GFI1Q99684 422 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 HDHD3Q9BSH5 251 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-211ENST00000641009 PARP12Q9H0J9 701 aaKnown RBP10.86□□□□□ -0.67
LINC00339-211ENST00000641009 LPAR5Q9H1C0 372 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 KLK15Q9H2R5 256 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 OR51J1Q9H342 316 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 PARP11Q9NR21 331 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 PLEKHJ1Q9NW61 149 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 STEAP1Q9UHE8 339 aa10.86□□□□□ -0.67
LINC00339-211ENST00000641009 BPNT1O95861 308 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 HSMCR30P0CW71 290 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
LINC00339-211ENST00000641009 RPS25P62851 125 aaKnown RBP10.85□□□□□ -0.67
LINC00339-211ENST00000641009 FHL3Q13643 280 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 C5orf64Q2M2E5 130 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms