RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, human

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-229	ENST00000639953	ERVK11-1	P61568	191 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	PPP1CB	P62140	327 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	CNN3	Q15417	329 aa	Known RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	MPPED2	Q15777	294 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	LRRC37A5P	Q49AS3	106 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953		Q5PR19	223 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ELP2	Q6IA86	826 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	HAGHL	Q6PII5	290 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	DHRS11	Q6UWP2	260 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	MRPL21	Q7Z2W9	205 aa	Known RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	DPPA2	Q7Z7J5	298 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	TGIF2LY	Q8IUE0	185 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ODF3L1	Q8IXM7	274 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ZDHHC23	Q8IYP9	409 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	SCCPDH	Q8NBX0	429 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	OR1J1	Q8NGS3	322 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	MRPL30	Q8TCC3	161 aa	Known RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	DAZAP1	Q96EP5	407 aa	Known RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	C5orf30	Q96GV9	206 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	PRRT1	Q99946	306 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	CMSS1	Q9BQ75	279 aa	Known RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	PLK3	Q9H4B4	646 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	RGCC	Q9H4X1	137 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953		Q9N2K0	584 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	DECR2	Q9NUI1	292 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ZNF701	Q9NV72	531 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	RCC2	Q9P258	522 aa	Known RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ATPIF1	Q9UII2	106 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ANXA10	Q9UJ72	324 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	NOP16	Q9Y3C1	178 aa	Known RBP	4.99	□□□□□ -1.61
ATM-229	ENST00000639953	SPEF1	Q9Y4P9	236 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ARFGEF3	Q5TH69	2177 aa		4.99	□□□□□ -1.61
ATM-229	ENST00000639953	ROS1	P08922	2347 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	MAST4	O15021	2626 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	C13orf42	A0A1B0GVH6	325 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	MEX3A	A1L020	520 aa	Known RBP	4.98	□□□□□ -1.61
ATM-229	ENST00000639953	HMSD	A8MTL9	139 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	FAM25E	A8MYX2	175 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953		B9A039	149 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953		L7N2F9	121 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	LGALS8	O00214	317 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	SCO1	O75880	301 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	DUS4L	O95620	317 aa	Known RBP	4.98	□□□□□ -1.61
ATM-229	ENST00000639953	NAPSA	O96009	420 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	RLN2	P04090	185 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	GRP	P07492	148 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	HOXB5	P09067	269 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	OR5H8	P0DN80	308 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	SLC25A4	P12235	298 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	PAX1	P15863	534 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	EGR1	P18146	543 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	RCC1	P18754	421 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM-229	ENST00000639953	FUT3	P21217	361 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	PPIF	P30405	207 aa	Known RBP	4.98	□□□□□ -1.61
ATM-229	ENST00000639953	FCGR2C	P31995	323 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	GLRX	P35754	106 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	AP2S1	P53680	142 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM-229	ENST00000639953	FGF12	P61328	243 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	TMEM187	Q14656	261 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	PHLDA2	Q53GA4	152 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	NHLRC3	Q5JS37	347 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	KHDC1L	Q5JSQ8	128 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	FAM74A1	Q5RGS3	127 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	PRAMEF6	Q5VXH4	476 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	ALKAL2	Q6UX46	152 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	FBXW12	Q6X9E4	464 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	SPNS3	Q6ZMD2	512 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	CIART	Q8N365	385 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM-229	ENST00000639953	SUMF2	Q8NBJ7	301 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	MAPK1IP1L	Q8NDC0	245 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	OR5A2	Q8NGI9	324 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	OR1S1	Q8NH92	325 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	CCDC107	Q8WV48	283 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	PPP1R1C	Q8WVI7	109 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	RDH5	Q92781	318 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	FAM210A	Q96ND0	272 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	DCTN5	Q9BTE1	182 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	C11orf1	Q9H5F2	150 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	ZNF442	Q9H7R0	627 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	WFDC1	Q9HC57	220 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	TAAR3P	Q9P1P4	343 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	MBD2	Q9UBB5	411 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	TNFSF18	Q9UNG2	199 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	SLC7A11	Q9UPY5	501 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	SPG11	Q96JI7	2443 aa		4.98	□□□□□ -1.61
ATM-229	ENST00000639953	HIVEP1	P15822	2718 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	ZAN	Q9Y493	2812 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	NAV2	Q8IVL1	2488 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953		A0A0G2JRQ6	117 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	CRYM-AS1	A6NIL9	109 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	SERPINE3	A8MV23	424 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	LYNX1	G3V0Z9	82 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	CDIPT	O14735	213 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	OR7C1	O76099	320 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-229	ENST00000639953	CSTB	P04080	98 aa	Known RBP	4.97	□□□□□ -1.61
ATM-229	ENST00000639953	IFNA6	P05013	189 aa		4.97	□□□□□ -1.61
ATM-229	ENST00000639953	CTSD	P07339	412 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM-229	ENST00000639953	NMB	P08949	121 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms