RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 FAM131AQ6UXB0 335 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 JAGN1Q8N5M9 183 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 OR52I1Q8NGK6 324 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 OR13C5Q8NGS8 318 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 MUL1Q969V5 352 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 FLYWCH2Q96CP2 140 aaKnown RBP11.55□□□□□ -0.56
SYNE2-228ENST00000639659 CLCC1Q96S66 551 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 BANF2Q9H503 90 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 SPACA1Q9HBV2 294 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 KCNIP1Q9NZI2 227 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 STUB1Q9UNE7 303 aa11.55□□□□□ -0.56
SYNE2-228ENST00000639659 DNAH1Q9P2D7 4330 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 HSPA12AO43301 675 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 MAS1P04201 325 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 HSPB1P04792 205 aaKnown RBP11.54□□□□□ -0.56
SYNE2-228ENST00000639659 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 GLIPR1L1Q6UWM5 242 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 LYPD6Q86Y78 171 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 TMED9Q9BVK6 235 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 ZNF355PQ9NSJ1 428 aa11.54□□□□□ -0.56
SYNE2-228ENST00000639659 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 IFNA6P05013 189 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 ALPLP05186 524 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-228ENST00000639659 CX3CL1P78423 397 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 GPR176Q14439 515 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 ACTBL2Q562R1 376 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 AWAT2Q6E213 333 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 GLDNQ6ZMI3 551 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-228ENST00000639659 PPP1R27Q86WC6 154 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 ODF3L1Q8IXM7 274 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 Q8N1Y9 231 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 OR2AK2Q8NG84 335 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 PYDC1Q8WXC3 89 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 SELENOIQ9C0D9 397 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 TUBA4BQ9H853 241 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 RETNQ9HD89 108 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 TPSG1Q9NRR2 321 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 RCC2Q9P258 522 aaKnown RBP11.53□□□□□ -0.56
SYNE2-228ENST00000639659 JPT1Q9UK76 154 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 GAB2Q9UQC2 676 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 CSMD3Q7Z407 3707 aa11.53□□□□□ -0.56
SYNE2-228ENST00000639659 HYDINQ4G0P3 5121 aa11.52□□□□□ -0.56
SYNE2-228ENST00000639659 H7C2Y5 167 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 ST8SIA5O15466 376 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 CRTAPO75718 401 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-228ENST00000639659 CIB2O75838 187 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 NDUFA3O95167 84 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 TRGV3P03979 118 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 GSTP1P09211 210 aaKnown RBP11.52□□□□□ -0.57
SYNE2-228ENST00000639659 CD40LGP29965 261 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 VEGFCP49767 419 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 TMEM267Q0VDI3 215 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-228ENST00000639659 RAB40BQ12829 278 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 OR2G6Q5TZ20 316 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 STEAP3Q658P3 488 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 ZNF660Q6AZW8 331 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-228ENST00000639659 RPL22L1Q6P5R6 122 aaKnown RBP11.52□□□□□ -0.57
SYNE2-228ENST00000639659 ZNF833PQ6ZTB9 187 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 TCTEX1D1Q8N7M0 179 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 NPBQ8NG41 125 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 IL1F10Q8WWZ1 152 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 Q96MT0 163 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 FAM110AQ9BQ89 295 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 C19orf73Q9NVV2 129 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 CKLFQ9UBR5 152 aa11.52□□□□□ -0.57
SYNE2-228ENST00000639659 A0A1W2PPK0 400 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 ANKRD34BA5PLL1 514 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 FCN1O00602 326 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 RRHO14718 337 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 RGS11O94810 467 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 BAG2O95816 211 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 IGLV1-51P01701 117 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 MGMTP16455 207 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 GABRB1P18505 474 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 ALDH3A2P51648 485 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 HAGHQ16775 308 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 C19orf54Q5BKX5 351 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 PYHIN1Q6K0P9 492 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 LFNGQ8NES3 379 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 FAM46BQ96A09 425 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 CNOT2Q9NZN8 540 aaKnown RBP11.51□□□□□ -0.57
SYNE2-228ENST00000639659 RNF150Q9ULK6 438 aa11.51□□□□□ -0.57
SYNE2-228ENST00000639659 TRAV8-7A0A075B6U6 113 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 LIMS3P0CW19 117 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 LIMS4P0CW20 117 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 RPL39P5Q59GN2 51 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 CBR4Q8N4T8 237 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 ZFP41Q8N8Y5 198 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 GRPEL2Q8TAA5 225 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
SYNE2-228ENST00000639659 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
SYNE2-228ENST00000639659 METTL1Q9UBP6 276 aaKnown RBP11.5□□□□□ -0.57
SYNE2-228ENST00000639659 RPL36Q9Y3U8 105 aaKnown RBP11.5□□□□□ -0.57
SYNE2-228ENST00000639659 PNMA8CA0A1B0GUJ8 204 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 C13orf42A0A1B0GVH6 325 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 YPEL1O60688 119 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 CA2P00918 260 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 224.2 ms