RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 HDGFL3Q9Y3E1 203 aa9.53□□□□□ -0.88
KCNMA1-259ENST00000639406 SH2D7A6NKC9 451 aaPredicted RBP9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 OR11H12B2RN74 326 aa9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 DUSP2Q05923 314 aa9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 RTP5Q14D33 572 aa9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 SLC23A3Q6PIS1 610 aa9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 OR11H1Q8NG94 326 aa9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 OR11H2Q8NH07 326 aa9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 CCL27Q9Y4X3 112 aa9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 MRPS18BQ9Y676 258 aaKnown RBP9.52□□□□□ -0.88
KCNMA1-259ENST00000639406 TIAM2Q8IVF5 1701 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 TNFSF13O75888 250 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 TMEM50AO95807 157 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 OR4D11Q8NGI4 311 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 HES7Q9BYE0 225 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 M0QZ24 198 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 CTSVO60911 334 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 SERF1AO75920 110 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 DNAL4O96015 105 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 SRP19P09132 144 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 CYB561P49447 251 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 CEACAM16Q2WEN9 425 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 ALKBH6Q3KRA9 238 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 RBPMS2Q6ZRY4 209 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 FAM19A2Q8N3H0 131 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 ORAOV1Q8WV07 137 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 CXCL13O43927 109 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 SRSF3P84103 164 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 C2orf83Q53S99 150 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 PGLYRP3Q96LB9 341 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 OR51B2Q9Y5P1 312 aa9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 GOLGA4Q13439 2230 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-259ENST00000639406 TRAV9-2A0A087WT02 112 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 PRRG2O14669 202 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 SRFP11831 508 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 CTLA4P16410 223 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 CD38P28907 300 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 NT5CQ8TCD5 201 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 LPAR2Q9HBW0 351 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 TCFL5Q9UL49 500 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 TSPAN2O60636 221 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 TMEM177Q53S58 311 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 RSPO2Q6UXX9 243 aaPredicted RBP9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 MRPS16Q9Y3D3 137 aaKnown RBP9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 NTN1O95631 604 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 EML2O95834 649 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 KLKB1P03952 638 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 CD1AP06126 327 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 SUMO3P55854 103 aaPredicted RBP9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 STARD6P59095 220 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 GAGE13Q4V321 117 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 DCAF10Q5QP82 559 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 OR4X2Q8NGF9 303 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 OR52M1Q8NGK5 317 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 BAHD1Q8TBE0 780 aaPredicted RBP9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 WFDC5Q8TCV5 224 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 CHODLQ9H9P2 273 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 RPS11P62280 158 aaKnown RBP eCLIP9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 HYAL1Q12794 435 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 LHFPL4Q7Z7J7 247 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 ABHD14BQ96IU4 210 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 PLAC1Q9HBJ0 212 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 NPVFQ9HCQ7 196 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 FGF21Q9NSA1 209 aa9.51□□□□□ -0.89
KCNMA1-259ENST00000639406 PPIAL4EA0A075B759 164 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 TRAV30A0A087WSZ9 112 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 ARL14EPLP0DKL9 152 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 PPIAL4FP0DN26 164 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 PXNP49023 591 aaPredicted RBP9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 TDGF1P3P51864 188 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 ZNF324BQ6AW86 544 aaPredicted RBP9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 LINC00696Q6ZRV3 163 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 TMEM178AQ8NBL3 297 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 TIMD4Q96H15 378 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 GRAMD2BQ96HH9 432 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 ALKBH3Q96Q83 286 aaPredicted RBP9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 NHP2Q9NX24 153 aaKnown RBP9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 PPIAL4AQ9Y536 164 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 EDIL3O43854 480 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 CIRBPQ14011 172 aaKnown RBP9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 TNXAQ16473 311 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 C1orf194Q5T5A4 169 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 SFTPA2Q8IWL1 248 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 SFTPA1Q8IWL2 248 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 DNASE2BQ8WZ79 361 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 SMIM8Q96KF7 97 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 CXCL16Q9H2A7 254 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 M0R1B8 84 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 HBBP68871 147 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 KHDC1LQ5JSQ8 128 aa9.5□□□□□ -0.89
KCNMA1-259ENST00000639406 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms