RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HIST1H2AAQ96QV6 131 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 SRD5A3Q9H8P0 318 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 KCNS2Q9ULS6 477 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 LAMP3Q9UQV4 416 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 RBM7Q9Y580 266 aaKnown RBP9.26□□□□□ -0.93
SNIP1-204ENST00000638725 TRBV6-6A0A0A6YYG2 114 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 IFNA1P01562 189 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 PFN1P07737 140 aaKnown RBP9.26□□□□□ -0.93
SNIP1-204ENST00000638725 GZMHP20718 246 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 RPP25LQ8N5L8 163 aaKnown RBP9.26□□□□□ -0.93
SNIP1-204ENST00000638725 OR5A2Q8NGI9 324 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 TAF15Q92804 592 aaKnown RBP eCLIP9.26□□□□□ -0.93
SNIP1-204ENST00000638725 APOBEC3DQ96AK3 386 aaPredicted RBP9.26□□□□□ -0.93
SNIP1-204ENST00000638725 OR51B6Q9H340 312 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
SNIP1-204ENST00000638725 TNRC6AQ8NDV7 1962 aaKnown RBP9.26□□□□□ -0.93
SNIP1-204ENST00000638725 RHBDL1O75783 438 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 OTX2P32243 289 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 CXCL12P48061 93 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 SSTP61278 116 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 RTP5Q14D33 572 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 TESK1Q15569 626 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 OR8G2PQ6IF36 304 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 TCEAL6Q6IPX3 200 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 CYP2G1PQ6ZSU1 146 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 DMRTC2Q8IXT2 367 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-204ENST00000638725 FAM58AQ8N1B3 248 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 OR5R1Q8NH85 324 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 TMEM45BQ96B21 275 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 SLC39A9Q9NUM3 307 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 PRSS50Q9UI38 385 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 WDR1O75083 606 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 IFNA10P01566 189 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 GZMBP10144 247 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 GFRA1P56159 465 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 MEF2BQ02080 365 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-204ENST00000638725 SLC38A11Q08AI6 406 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-204ENST00000638725 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 BSXQ3C1V8 233 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 ACSF3Q4G176 576 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-204ENST00000638725 OR1P1Q8NH06 330 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 OR5P3Q8WZ94 311 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 ELOVL1Q9BW60 279 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 SLC25A22Q9H936 323 aa9.25□□□□□ -0.93
SNIP1-204ENST00000638725 DEGS1O15121 323 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 NDUFB7P17568 137 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
SNIP1-204ENST00000638725 P2RY6Q15077 328 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 NRN1LQ496H8 165 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 TUSC5Q8IXB3 177 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 GATAD1Q8WUU5 269 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 PINX1Q96BK5 328 aaKnown RBP9.24□□□□□ -0.93
SNIP1-204ENST00000638725 PYGO2Q9BRQ0 406 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 TMEM9BQ9NQ34 198 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 R4GN57 208 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 DVL1O14640 695 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 SS18L1O75177 396 aaPredicted RBP9.24□□□□□ -0.93
SNIP1-204ENST00000638725 KBTBD11O94819 623 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 ACSM6Q6P461 480 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.24□□□□□ -0.93
SNIP1-204ENST00000638725 LINC00596Q86U02 117 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 OR51G1Q8NGK1 321 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 AGMATQ9BSE5 352 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 FRYLO94915 3013 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 PIGBOS1A0A0B4J2F0 54 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 A0A1W2PR80 420 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 H7BYZ3 331 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.24□□□□□ -0.93
SNIP1-204ENST00000638725 CLDN1O95832 211 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 WNT2P09544 360 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 GALR1P47211 349 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 PPP1R32Q7Z5V6 425 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 POM121L2Q96KW2 1035 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 PCGF1Q9BSM1 259 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 PARLQ9H300 379 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 ESPL1Q14674 2120 aa9.24□□□□□ -0.93
SNIP1-204ENST00000638725 ARHGAP21Q5T5U3 1957 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 A0A1W2PPQ1 181 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 XKRY2A2RUG3 117 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 ANKRD30BLA7E2S9 258 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 SIRPB1O00241 398 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 SLC31A2O15432 143 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 CELA3AP09093 270 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 PAX1P15863 534 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 FGF7P21781 194 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 GNG3P63215 75 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 ZNF66Q6ZN08 573 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 ZNF573Q86YE8 665 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 ZNF664Q8N3J9 261 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 LINC00470Q9BZP3 86 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 LIN7CQ9NUP9 197 aaKnown RBP9.23□□□□□ -0.93
SNIP1-204ENST00000638725 VPS13AQ96RL7 3174 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 IGKV3D-15A0A087WSY6 115 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 LRP5LA4QPB2 252 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 PPP5D1E7EU14 171 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 MKRN2OSH3BPM6 223 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 CA6P23280 308 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 APLNRP35414 380 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 Q6P435 159 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms