RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 HINT1P49773 126 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-213ENST00000638680 CXorf66Q5JRM2 361 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-213ENST00000638680 OR2V2Q96R30 315 aa16.05■□□□□ 0.16
SCARB2-213ENST00000638680 TRBV5-7A0A0A0MS05 114 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 M0R296 226 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 NMUP48645 174 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 RND1Q92730 232 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 SNRPCP09234 159 aaKnown RBP16.04■□□□□ 0.16
SCARB2-213ENST00000638680 FOXC1Q12948 553 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 WDR25Q64LD2 544 aaPredicted RBP16.04■□□□□ 0.16
SCARB2-213ENST00000638680 SMIM12Q96EX1 92 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 SPEM2Q0P670 501 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 ZFP30Q9Y2G7 519 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 PSG4Q00888 419 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 MEF2BQ02080 365 aaPredicted RBP16.04■□□□□ 0.16
SCARB2-213ENST00000638680 OR8I2Q8N0Y5 310 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 NFAM1Q8NET5 270 aaPredicted RBP16.04■□□□□ 0.16
SCARB2-213ENST00000638680 SAP30LQ9HAJ7 183 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 LY75O60449 1722 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 HPRT1P00492 218 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 OR52M1Q8NGK5 317 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 OR2J1Q9GZK6 312 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 SH3BGRL3Q9H299 93 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 NPVFQ9HCQ7 196 aa16.04■□□□□ 0.16
SCARB2-213ENST00000638680 MYO7AQ13402 2215 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 TRBV23-1A0A0A0MS06 115 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 STAG3L2P0CL84 134 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 FAM27BQ5VT28 67 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 TP53RKQ96S44 253 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 NPDC1Q9NQX5 325 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-213ENST00000638680 CDK2AP1O14519 115 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 REG1BP48304 166 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 DGAT2L7PQ6IED9 249 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 MUC15Q8N387 334 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 DEFB124Q8NES8 71 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 CA2P00918 260 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 ROM1Q03395 351 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 CEACAM21Q3KPI0 293 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 ZNF362Q5T0B9 420 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-213ENST00000638680 TPRX1Q8N7U7 411 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 TMEM208Q9BTX3 173 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 RBKSQ9H477 322 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 INSIG2Q9Y5U4 225 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 RAB29O14966 203 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 ZNHIT1O43257 154 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 DDTP30046 118 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 C1orf100Q5SVJ3 147 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 OR8B3Q8NGG8 313 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 OR8B2Q96RD0 313 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 RAB1BQ9H0U4 201 aa16.03■□□□□ 0.16
SCARB2-213ENST00000638680 ISG15P05161 165 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 NGFRP08138 427 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 SIAH2O43255 324 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 FGF12P61328 243 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 ZNF738Q8NE65 137 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 FBLL1A6NHQ2 334 aaKnown RBP16.02■□□□□ 0.16
SCARB2-213ENST00000638680 ZNF841Q6ZN19 808 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 FAM181AQ8N9Y4 354 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 RAB1CQ92928 201 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 ARID1AO14497 2285 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 KNL1Q8NG31 2342 aa16.02■□□□□ 0.16
SCARB2-213ENST00000638680 C5orf66Q9H5L9 145 aa16.02■□□□□ 0.15
SCARB2-213ENST00000638680 HIGD1AQ9Y241 93 aa16.02■□□□□ 0.15
SCARB2-213ENST00000638680 IGLV1-36A0A0B4J1U3 117 aa16.02■□□□□ 0.15
SCARB2-213ENST00000638680 UQCRFS1P47985 274 aa16.02■□□□□ 0.15
SCARB2-213ENST00000638680 MIA3Q5JRA6 1907 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 RECKO95980 971 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 IBA57Q5T440 356 aaKnown RBP16.01■□□□□ 0.15
SCARB2-213ENST00000638680 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 SELENOHQ8IZQ5 122 aaKnown RBP16.01■□□□□ 0.15
SCARB2-213ENST00000638680 CXorf65A6NEN9 183 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 CLDN14O95500 239 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 RND3P61587 244 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 A0A0J9YW62 118 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 ABHD14BQ96IU4 210 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 KIAA1217Q5T5P2 1943 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 DNPH1O43598 174 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 CD3EP07766 207 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 ERGP11308 486 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 TEX30Q5JUR7 227 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 WIPI2Q9Y4P8 454 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 ARFGEF1Q9Y6D6 1849 aa16.01■□□□□ 0.15
SCARB2-213ENST00000638680 HBZP02008 142 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 PRDX2P32119 198 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 TFF2Q03403 129 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 INO80CQ6PI98 192 aaPredicted RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 KCNK17Q96T54 332 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 IGKV3-7A0A075B6H7 116 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 MOSPD3O75425 235 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 PGLYRP1O75594 196 aaPredicted RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 COMPP49747 757 aaPredicted RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 RBPMS2Q6ZRY4 209 aaKnown RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 SDHCQ99643 169 aaPredicted RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 MPTX1A8MV57 137 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 K7ERU9 68 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 DLX1P56177 255 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 UNQ9370/PRO34162Q6UXP9 181 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 TAF15Q92804 592 aaKnown RBP eCLIP16■□□□□ 0.15
SCARB2-213ENST00000638680 GPHA2Q96T91 129 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms