RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CD80P33681 288 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 GLIPR1P48060 266 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 DYNLT3P51808 116 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 MIDNQ504T8 468 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 MUCL1Q96DR8 90 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 CACNG5Q9UF02 275 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 RNF150Q9ULK6 438 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 KIAA1324LA8MWY0 1029 aaPredicted RBP18.04■□□□□ 0.48
CLN6-224ENST00000638076 IGKV1-5P01602 117 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 CRYAAP02489 173 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 CD5P06127 495 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 ATF4P18848 351 aaPredicted RBP18.04■□□□□ 0.48
CLN6-224ENST00000638076 BAXQ07812 192 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 TMEM182Q6ZP80 229 aaPredicted RBP18.04■□□□□ 0.48
CLN6-224ENST00000638076 CD177Q8N6Q3 437 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 ZNF645Q8N7E2 425 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 OR2D2Q9H210 308 aa18.04■□□□□ 0.48
CLN6-224ENST00000638076 F12P00748 615 aaPredicted RBP18.03■□□□□ 0.48
CLN6-224ENST00000638076 RAB5CP51148 216 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 C19orf12Q9NSK7 152 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 EGR1P18146 543 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 CD200P41217 278 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 KRTCAP3Q53RY4 240 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 VHLLQ6RSH7 139 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 FAM57AQ8TBR7 257 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 NINJ1Q92982 152 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 SFXN3Q9BWM7 321 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 PRELID1Q9Y255 219 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 RFNGQ9Y644 331 aa18.03■□□□□ 0.48
CLN6-224ENST00000638076 RNF212BA8MTL3 300 aa18.02■□□□□ 0.48
CLN6-224ENST00000638076 SFTA3P0C7M3 94 aa18.02■□□□□ 0.48
CLN6-224ENST00000638076 ATP6V0CP27449 155 aa18.02■□□□□ 0.48
CLN6-224ENST00000638076 DVL1P1P54792 670 aaPredicted RBP18.02■□□□□ 0.48
CLN6-224ENST00000638076 FAM180AQ6UWF9 173 aa18.02■□□□□ 0.48
CLN6-224ENST00000638076 OR13A1Q8NGR1 328 aa18.02■□□□□ 0.48
CLN6-224ENST00000638076 STRAPQ9Y3F4 350 aaKnown RBP18.02■□□□□ 0.48
CLN6-224ENST00000638076 MED19A0JLT2 244 aaPredicted RBP18.01■□□□□ 0.47
CLN6-224ENST00000638076 H3BP45 60 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 MKRN2OSH3BPM6 223 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 IGHV3-13P01766 116 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 CEACAM8P31997 349 aaPredicted RBP18.01■□□□□ 0.47
CLN6-224ENST00000638076 PRDX2P32119 198 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 SSTR5P35346 364 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 ZNF295-AS1Q8N0V1 137 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 MEX3AA1L020 520 aaKnown RBP18.01■□□□□ 0.47
CLN6-224ENST00000638076 C9JQL5 133 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 GLRXP35754 106 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 SNCAP37840 140 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 OR2G3Q8NGZ4 309 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 C5orf30Q96GV9 206 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 LRFN3Q9BTN0 628 aa18.01■□□□□ 0.47
CLN6-224ENST00000638076 SRRM5B3KS81 715 aa18■□□□□ 0.47
CLN6-224ENST00000638076 PPP1CCP36873 323 aaKnown RBP18■□□□□ 0.47
CLN6-224ENST00000638076 KLF3P57682 345 aaPredicted RBP18■□□□□ 0.47
CLN6-224ENST00000638076 RPL23AP62750 156 aaKnown RBP18■□□□□ 0.47
CLN6-224ENST00000638076 ZNF808Q8N4W9 903 aaPredicted RBP18■□□□□ 0.47
CLN6-224ENST00000638076 ZBTB34Q8NCN2 500 aa18■□□□□ 0.47
CLN6-224ENST00000638076 OR2V2Q96R30 315 aa18■□□□□ 0.47
CLN6-224ENST00000638076 RAB40CQ96S21 281 aa18■□□□□ 0.47
CLN6-224ENST00000638076 TOLLIPQ9H0E2 274 aa18■□□□□ 0.47
CLN6-224ENST00000638076 CEP250Q9BV73 2442 aa18■□□□□ 0.47
CLN6-224ENST00000638076 CHD3Q12873 2000 aaKnown RBP18■□□□□ 0.47
CLN6-224ENST00000638076 GVINP1Q7Z2Y8 2422 aa18■□□□□ 0.47
CLN6-224ENST00000638076 NKX6-1P78426 367 aaPredicted RBP18■□□□□ 0.47
CLN6-224ENST00000638076 FAM27E3Q08E93 113 aa18■□□□□ 0.47
CLN6-224ENST00000638076 SPRNQ5BIV9 151 aa18■□□□□ 0.47
CLN6-224ENST00000638076 LURAP1Q96LR2 239 aa18■□□□□ 0.47
CLN6-224ENST00000638076 TXNL1O43396 289 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 SYNGR2O43760 224 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 BMP5P22003 454 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 EDDM3AQ14507 147 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 C3orf36Q3SXR2 165 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 STX12Q86Y82 276 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 FGFRL1Q8N441 504 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 RFESDQ8TAC1 157 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 FAM213BQ8TBF2 198 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 ABHD17AQ96GS6 310 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 MUC6Q6W4X9 2439 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 IGKV1D-17A0A075B6S4 117 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 IGHV3-43A0A0B4J1X8 118 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 FAM157AC9JC47 383 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 K7N7A8 449 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 SNAPINO95295 136 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 IGHV3-43DP0DP04 118 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 ASCL5Q7RTU5 278 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 COMMD1Q8N668 190 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 OR10Z1Q8NGY1 313 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 DCTN5Q9BTE1 182 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 WSB1Q9Y6I7 421 aa17.99■□□□□ 0.47
CLN6-224ENST00000638076 TRIM77I1YAP6 450 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 RAMP3O60896 148 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 ZNF737O75373 536 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 RPL30P62888 115 aaKnown RBP17.98■□□□□ 0.47
CLN6-224ENST00000638076 TMEM267Q0VDI3 215 aaPredicted RBP17.98■□□□□ 0.47
CLN6-224ENST00000638076 C22orf34Q6ZV56 151 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 IQCF2Q8IXL9 164 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 GCSAMQ8N6F7 178 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 ATP5SQ99766 215 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 BSNQ9UPA5 3926 aa17.98■□□□□ 0.47
CLN6-224ENST00000638076 ATP6V1G2-DDX39BF2Z307 99 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms