RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 EXTL2Q9UBQ6 330 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 ADAM30Q9UKF2 790 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 MGAT4AQ9UM21 535 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 AMMECR1Q9Y4X0 333 aaPredicted RBP7.84□□□□□ -1.15
LINC00339-210ENST00000635675 TENM1Q9UKZ4 2725 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 SLC31A2O15432 143 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 YPEL1O60688 119 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 CRYBA1P05813 215 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 DIAPH2-AS1Q14236 149 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 GNMTQ14749 295 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 LY6EQ16553 131 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 CCBE1Q6UXH8 406 aaPredicted RBP7.83□□□□□ -1.16
LINC00339-210ENST00000635675 MFSD4AQ8N468 514 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 OR10V1Q8NGI7 309 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 OR10X1Q8NGY0 326 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 S100ZQ8WXG8 99 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 ACOT12Q8WYK0 555 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 ST6GALNAC6Q969X2 333 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 KCTD12Q96CX2 325 aaKnown RBP7.83□□□□□ -1.16
LINC00339-210ENST00000635675 YPEL2Q96QA6 119 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 WDR12Q9GZL7 423 aaKnown RBP7.83□□□□□ -1.16
LINC00339-210ENST00000635675 JPT1Q9UK76 154 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 ELF5Q9UKW6 265 aaPredicted RBP7.83□□□□□ -1.16
LINC00339-210ENST00000635675 TCF19Q9Y242 345 aa7.83□□□□□ -1.16
LINC00339-210ENST00000635675 A0A0A6YYH2 397 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 IGKV1-6A0A0C4DH72 117 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 A6NDX4 124 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 A6NJ64 397 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 TRDCB7Z8K6 153 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 CHST1O43916 411 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 NDUFA7O95182 113 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 FCGR3AP08637 254 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 GSTP1P09211 210 aaKnown RBP7.82□□□□□ -1.16
LINC00339-210ENST00000635675 SCTP09683 121 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 BRS3P32247 399 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 PPP1CCP36873 323 aaKnown RBP7.82□□□□□ -1.16
LINC00339-210ENST00000635675 HLA-DRB3P79483 266 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 MRPS15P82914 257 aaKnown RBP7.82□□□□□ -1.16
LINC00339-210ENST00000635675 FOXL1Q12952 345 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 ARFRP1Q13795 201 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 IL18Q14116 193 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 SRSF7Q16629 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF260Q3ZCT1 412 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 UBE2NLQ5JXB2 153 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 SPANXN2Q5MJ10 180 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 HACD4Q5VWC8 232 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 CCDC144NLQ6NUI1 221 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 LIAT1Q6ZQX7 453 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 IL1F10Q8WWZ1 152 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 TOMM40LQ969M1 308 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 RPEQ96AT9 228 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 ABCG5Q9H222 651 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 ABCB10Q9NRK6 738 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF230Q9UIE0 474 aaPredicted RBP7.82□□□□□ -1.16
LINC00339-210ENST00000635675 A3GALT2U3KPV4 340 aa7.82□□□□□ -1.16
LINC00339-210ENST00000635675 TRAV18A0A075B6X5 111 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 A0A1W2PPI3 338 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 TMEM235A6NFC5 223 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 FAM90A9PA6NNJ1 464 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 TSPAN9O75954 239 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 RGS11O94810 467 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 DTYMKP23919 212 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 CD24P25063 80 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 CD40LGP29965 261 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 MNDAP41218 407 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 KIR2DS4P43632 304 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 RAB7AP51149 207 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 ARHGDIBP52566 201 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF137PP52743 207 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 RAG2P55895 527 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 PITPNAQ00169 270 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF816Q0VGE8 651 aaPredicted RBP7.81□□□□□ -1.16
LINC00339-210ENST00000635675 KIR2DS1Q14954 304 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 PNLIPRP3Q17RR3 467 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 PYDC2Q56P42 97 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 AWAT1Q58HT5 328 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 Q6ZS49 121 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 CCDC190Q86UF4 302 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 OR8H3Q8N146 312 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 OR4A4PQ8NGN8 299 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 CFHR4Q92496 578 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 PHF21AQ96BD5 680 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 DIABLOQ9NR28 239 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 PITPNC1Q9UKF7 332 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 MRPS7Q9Y2R9 242 aaKnown RBP7.81□□□□□ -1.16
LINC00339-210ENST00000635675 MMP24Q9Y5R2 645 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 V9GYH0 126 aa7.81□□□□□ -1.16
LINC00339-210ENST00000635675 IGKV1D-8A0A087WSZ0 117 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 LINC00854A0A1B0GVQ3 168 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 FABP12A6NFH5 140 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 ITGB1BP1O14713 200 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 HSD17B6O14756 317 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 TIMM23O14925 209 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 FABP7O15540 132 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 XRCC3O43542 346 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 SSX5O60225 188 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 DIRAS3O95661 229 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 GAPDHP04406 335 aaKnown RBP7.8□□□□□ -1.16
LINC00339-210ENST00000635675 GSTT2P0CG29 244 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 GSTT2BP0CG30 244 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms