RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 CLEC12BQ2HXU8 276 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LRRC75BQ2VPJ9 315 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DNAL1Q4LDG9 190 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PDZD11Q5EBL8 140 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZNF678Q5SXM1 525 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ELP2Q6IA86 826 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PPP1R2P3Q6NXS1 205 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 MDP1Q86V88 176 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DOLPP1Q86YN1 238 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ITPRIPQ8IWB1 547 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SGPP2Q8IWX5 399 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ORMDL3Q8N138 153 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 STK40Q8N2I9 435 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DEFB125Q8N687 156 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZNF645Q8N7E2 425 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZNF676Q8N7Q3 588 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CCNYL1Q8N7R7 359 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 YIPF7Q8N8F6 280 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR8A1Q8NGG7 326 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR4P4Q8NGL7 312 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR10D3Q8NH80 312 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PIGXQ8TBF5 258 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SPPL2BQ8TCT7 592 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 EEF1AKMT1Q8WVE0 214 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 C22orf15Q8WYQ4 148 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 MAL2Q969L2 176 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 RERGQ96A58 199 aaPredicted RBP0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR2M4Q96R27 311 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZNF436Q9C0F3 470 aaPredicted RBP0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR51B6Q9H340 312 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR51I1Q9H343 314 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LINC00574Q9H8X3 128 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 FAM60AQ9NP50 221 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TMEM38BQ9NVV0 291 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DNAJC27Q9NZQ0 273 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZNF492Q9P255 531 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SMPXQ9UHP9 88 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 C3orf18Q9UK00 162 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 HES2Q9Y543 173 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 INSIG2Q9Y5U4 225 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SLX4Q8IY92 1834 aa0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 WRNQ14191 1432 aaPredicted RBP eCLIP0.89□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZNF106Q9H2Y7 1883 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ROBO3Q96MS0 1386 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PLXND1Q9Y4D7 1925 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LTBP2Q14767 1821 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TAF1LQ8IZX4 1826 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LOC102724200A0A096LPH7 203 aaPredicted RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 IGHV3-43A0A0B4J1X8 118 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TRAV8-2A0A0B4J237 113 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 IGKV1-12A0A0C4DH73 117 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SMIM9A6NGZ8 99 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CD300LBA8K4G0 201 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TMEM238C9JI98 176 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 M0QYV0 167 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 M0R036 132 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 KCNK1O00180 336 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CHP2O43745 196 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ENSAO43768 121 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 GATBO75879 557 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DHRS3O75911 302 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 IGKV1D-12P01611 117 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 IGLV3-27P01718 113 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TYMSP04818 313 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 IL6P05231 212 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CALB1P05937 261 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CRYGDP07320 174 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SOD3P08294 240 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 RPS17P08708 135 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CST2P09228 141 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR5G3P0C626 314 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CTSEP14091 401 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SPNP16150 400 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CXCL3P19876 107 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PSMA1P25786 263 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PSMB9P28065 219 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ELK4P28324 431 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 RPL12P30050 165 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TALDO1P37837 337 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SLC18A1P54219 525 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CCL23P55773 120 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TMEM33P57088 247 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SNAP25P60880 206 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PPP1CAP62136 330 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 BASP1P80723 227 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TNFAIP6P98066 277 aaPredicted RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 GTF2BQ00403 316 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 RUNX1Q01196 453 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ATP5G2Q06055 141 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 AESQ08117 197 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 EBPQ15125 230 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PMVKQ15126 192 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 HIST3H3Q16695 136 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LUZP6Q538Z0 58 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TRMT12Q53H54 448 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 MESTQ5EB52 335 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TMEM69Q5SWH9 247 aa0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 MRPL2Q5T653 305 aaKnown RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OGFRL1Q5TC84 451 aaPredicted RBP0.88□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LCN8Q6JVE9 175 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms