RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FAM219AQ8IW50 185 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 ZNF561Q8N587 486 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 OR2C3Q8N628 320 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 KDF1Q8NAX2 398 aaPredicted RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 ST6GALNAC3Q8NDV1 305 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 OR52L2PQ8NGH6 319 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 OR13A1Q8NGR1 328 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 CORO2AQ92828 525 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 ARL11Q969Q4 196 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 SMIM8Q96KF7 97 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 WFIKKN1Q96NZ8 548 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 YPEL2Q96QA6 119 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 RAB40CQ96S21 281 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 GINS3Q9BRX5 216 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 SLC25A31Q9H0C2 315 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 FAM234AQ9H0X4 552 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 LINC00574Q9H8X3 128 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 WFDC1Q9HC57 220 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 COA4Q9NYJ1 87 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 OR6C3Q9NZP0 311 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 FBXL17Q9UF56 701 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 PPP1R3CQ9UQK1 317 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 RCL1Q9Y2P8 373 aaKnown RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 RAXQ9Y2V3 346 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 RNF115Q9Y4L5 304 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 RBM7Q9Y580 266 aaKnown RBP4.64□□□□□ -1.67
NEK3-211ENST00000629912 SESN1Q9Y6P5 492 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 PLCE1Q9P212 2302 aa4.64□□□□□ -1.67
NEK3-211ENST00000629912 PCNX1Q96RV3 2341 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 SPTBN2O15020 2390 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 CFAP47Q6ZTR5 3102 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 USF3Q68DE3 2245 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 FAM24AA6NFZ4 105 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 C17orf100A8MU93 164 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TEX46H3BTG2 121 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TOR1AO14656 332 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 ABCD4O14678 606 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TNFRSF13BO14836 293 aaPredicted RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 TNFSF12O43508 249 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 CHST1O43916 411 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 IGKV1-5P01602 117 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 OR4A8P0C604 315 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 SPP1P10451 314 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 SFTPCP11686 197 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 IRF2P14316 349 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 M6PRP20645 277 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 ZP3P21754 424 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 LPAR6P43657 344 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 ASCL1P50553 236 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 RAB5CP51148 216 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 ARHGDIBP52566 201 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 LOXL3P58215 753 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TAS2R30P59541 319 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 POLR2GP62487 172 aaKnown RBP eCLIP4.63□□□□□ -1.67
NEK3-211ENST00000629912 RPL30P62888 115 aaKnown RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 VAMP2P63027 116 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 EWSR1Q01844 656 aaKnown RBP eCLIP4.63□□□□□ -1.67
NEK3-211ENST00000629912 NHLH2Q02577 135 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 BSPH1Q075Z2 132 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 BAXQ07812 192 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 CATR1Q13166 79 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 SWI5Q1ZZU3 235 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 MST1LQ2TV78 715 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TMEM30BQ3MIR4 351 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 MORN2Q502X0 79 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 PRR30Q53SZ7 412 aaPredicted RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 FAM209AQ5JX71 171 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 FAM74A1Q5RGS3 127 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 NCMAPQ5T1S8 102 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 STUMQ69YW2 141 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 Q6ZRM9 215 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 CCDC28AQ8IWP9 274 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 FGFRL1Q8N441 504 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 PRR18Q8N4B5 295 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TMEM252Q8N6L7 170 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 GALNT11Q8NCW6 608 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 OR51H1Q8NH63 302 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 LYPD6BQ8NI32 183 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 CD300LFQ8TDQ1 290 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 MRGPRDQ8TDS7 321 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TMED6Q8WW62 240 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 EDARADDQ8WWZ3 215 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 NINJ1Q92982 152 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 C14orf79Q96F83 325 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 BSCL2Q96G97 398 aaPredicted RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 GPHA2Q96T91 129 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 HSD17B10Q99714 261 aaKnown RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 AGMATQ9BSE5 352 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 EGLN1Q9GZT9 426 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 PARP12Q9H0J9 701 aaKnown RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 ESRP2Q9H6T0 727 aaKnown RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 ZNF665Q9H7R5 613 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 OR2S2Q9NQN1 319 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 PARP11Q9NR21 331 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 LYRM2Q9NU23 88 aaPredicted RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 TAS2R3Q9NYW6 316 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 LPAR3Q9UBY5 353 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 JPT1Q9UK76 154 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 RNF150Q9ULK6 438 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms