RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 PYHIN1Q6K0P9 492 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 ODF3L1Q8IXM7 274 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 OR52L2PQ8NGH6 319 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 TAF9BQ9HBM6 251 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 AMBNQ9NP70 447 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 KCNIP1Q9NZI2 227 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 RCC2Q9P258 522 aaKnown RBP12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 PEX16Q9Y5Y5 336 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 ARPC1BO15143 372 aaKnown RBP12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 IGLV1-51P01701 117 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 ALPLP05186 524 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 ARSBP15848 533 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 CD40LGP29965 261 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 CRIP2P52943 208 aaPredicted RBP12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 RAB40BQ12829 278 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 GNMTQ14749 295 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 PLGLAQ15195 96 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 LRRC36Q1X8D7 754 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 GAPTQ8N292 157 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 MRPS24Q96EL2 167 aaKnown RBP12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 MS4A10Q96PG2 267 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 ZNF184Q99676 751 aaPredicted RBP12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 JPT1Q9UK76 154 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 RNF150Q9ULK6 438 aa12.01□□□□□ -0.49
PDLIM3-213ENST00000629667 CA11O75493 328 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 PPP1CCP36873 323 aaKnown RBP12□□□□□ -0.49
PDLIM3-213ENST00000629667 TPPP2P59282 170 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 CX3CL1P78423 397 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 RIPK1Q13546 671 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 ACTBL2Q562R1 376 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 RPL22L1Q6P5R6 122 aaKnown RBP12□□□□□ -0.49
PDLIM3-213ENST00000629667 ZNF833PQ6ZTB9 187 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 OR52I1Q8NGK6 324 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 ORAI1Q96D31 301 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 Q96MT0 163 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 FBXL15Q9H469 300 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 NUBP2Q9Y5Y2 271 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 TNCP24821 2201 aa12□□□□□ -0.49
PDLIM3-213ENST00000629667 SAA2-SAA4A0A096LPE2 208 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 EI24O14681 340 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 RRHO14718 337 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 YPEL1O60688 119 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 RGS11O94810 467 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 SAA2P0DJI9 122 aaPredicted RBP11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 GABRB1P18505 474 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 OR3A3P47888 321 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 HAGHQ16775 308 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 CCDC58Q4VC31 144 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 CD200R1LQ6Q8B3 271 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 UNQ5815/PRO19632Q6UWF5 114 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 ZNF554Q86TJ5 538 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 PPP1R27Q86WC6 154 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 OR2AK2Q8NG84 335 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 YPEL2Q96QA6 119 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 SLA2Q9H6Q3 261 aa11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 MBNL3Q9NUK0 354 aaKnown RBP11.99□□□□□ -0.49
PDLIM3-213ENST00000629667 UBE2QL1A1L167 161 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 SC5DO75845 299 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 MAS1P04201 325 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 EGR2P11161 476 aaPredicted RBP11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 HTD2P86397 168 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 XAF1Q6GPH4 301 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 GLIPR1L1Q6UWM5 242 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 FAM131AQ6UXB0 335 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 IL17DQ8TAD2 202 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 MUL1Q969V5 352 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 RHOVQ96L33 236 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 FAM103A1Q9BTL3 118 aaKnown RBP11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 SELENOIQ9C0D9 397 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 TUBA4BQ9H853 241 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 CNOT2Q9NZN8 540 aaKnown RBP11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 CKLFQ9UBR5 152 aa11.98□□□□□ -0.49
PDLIM3-213ENST00000629667 H0Y980 276 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 FCN1O00602 326 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 TRGV3P03979 118 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 GSTP1P09211 210 aaKnown RBP11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 LIMS3P0CW19 117 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 LIMS4P0CW20 117 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 IGFBP3P17936 291 aaPredicted RBP11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 FUT3P21217 361 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 ZP3P21754 424 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 ALDH3A2P51648 485 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 AWAT2Q6E213 333 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 C5orf24Q7Z6I8 188 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 JAGN1Q8N5M9 183 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 GALMQ96C23 342 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 TMED9Q9BVK6 235 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 BANF2Q9H503 90 aa11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 RANGRFQ9HD47 186 aaPredicted RBP11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 RPL36Q9Y3U8 105 aaKnown RBP11.97□□□□□ -0.49
PDLIM3-213ENST00000629667 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 TFAP2AP05549 437 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 GLAP06280 429 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 MGMTP16455 207 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 LY6G6FQ5SQ64 297 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms