RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CSN2P05814 226 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF84P51523 738 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ECH1Q13011 328 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TAF13Q15543 124 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 MICBQ29980 383 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 LHFPL1Q86WI0 220 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ARRDC1Q8N5I2 433 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TEX29Q8N6K0 151 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM230Q96A57 120 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 FAM71F1Q96KD3 344 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 LINC00052Q96N35 136 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 DIRC2Q96SL1 478 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TM2D1Q9BX74 207 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM59Q9BXS4 323 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 RASL12Q9NYN1 266 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 GHRLQ9UBU3 117 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 PURGQ9UJV8 347 aaKnown RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 NOP16Q9Y3C1 178 aaKnown RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 LOC105371267A0A1B0GV96 52 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 MDFIC2A0A1B0GVS7 189 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 A0A1W2PP11 408 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 FAM90A8PA6NJQ4 464 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 CCSO14618 274 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 CA11O75493 328 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 DHRS3O75911 302 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 FAM90A13PP0C7W8 464 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 FAM90A24PP0C7X0 464 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 COMPP49747 757 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TAS2R31P59538 309 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 FAM189A2Q15884 450 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 KRTAP27-1Q3LI81 207 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF718Q3SXZ3 478 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 SPRNQ5BIV9 151 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 C1QL2Q7Z5L3 287 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF546Q86UE3 836 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF283Q8N7M2 679 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 CCDC54Q8NEL0 328 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM185AQ8NFB2 350 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 OR56B1Q8NGI3 324 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 OR4K15Q8NH41 348 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 COQ8AQ8NI60 647 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 SLC25A40Q8TBP6 338 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 PPP1R1CQ8WVI7 109 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 C10orf35Q96D05 121 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 RAB3CQ96E17 227 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 ELOVL1Q9BW60 279 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 BCL2L14Q9BZR8 327 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 CHST5Q9GZS9 411 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM38BQ9NVV0 291 aa4.01□□□□□ -1.77
LINC00550-201ENST00000629293 TRAV40A0A0B4J280 105 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 A0A0B4J2A0 478 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 NGFP01138 241 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 IGHV1-46P01743 117 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 PMP2P02689 132 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 CRYBA1P05813 215 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 MED14OSP0DP75 135 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 HKR1P10072 659 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF32P17041 273 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 GUCA1AP43080 201 aaPredicted RBP4□□□□□ -1.77
LINC00550-201ENST00000629293 CBX5P45973 191 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 ATP1B3P54709 279 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 TNFAIP6P98066 277 aaPredicted RBP4□□□□□ -1.77
LINC00550-201ENST00000629293 MOB3CQ70IA8 216 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 SLC38A6Q8IZM9 456 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 KIR3DL3Q8N743 410 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 GJC3Q8NFK1 279 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 OR2Z1Q8NG97 314 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 PP6455Q8WZ26 134 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 PHYHIPLQ96FC7 376 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 ARHGAP5-AS1Q96IT6 56 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 PHB2Q99623 299 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF747Q9BV97 191 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 BANF2Q9H503 90 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 C5orf66Q9H5L9 145 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 SHPKQ9UHJ6 478 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 GPR132Q9UNW8 380 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 DHRS7CA6NNS2 312 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 PAGE4O60829 102 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 FOXH1O75593 365 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 SPDEFO95238 335 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 HCKP08631 526 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 IGHV4-38-2P0DP08 117 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 RPS2P15880 293 aaKnown RBP4□□□□□ -1.77
LINC00550-201ENST00000629293 PTGFRP43088 359 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 MRPS34P82930 218 aaKnown RBP4□□□□□ -1.77
LINC00550-201ENST00000629293 KISS1Q15726 138 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 UBE2V2Q15819 145 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 ACOT7LQ6ZUV0 252 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 COMMD2Q86X83 199 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 PDZD9Q8IXQ8 264 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM116Q8NCL8 245 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 BHLHE23Q8NDY6 225 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 CPEB3Q8NE35 698 aaKnown RBP4□□□□□ -1.77
LINC00550-201ENST00000629293 TERB2Q8NHR7 220 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 MARCH1Q8TCQ1 289 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 KLF14Q8TD94 323 aaPredicted RBP4□□□□□ -1.77
LINC00550-201ENST00000629293 PGAM5Q96HS1 289 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 BOD1Q96IK1 185 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF75AQ96N20 296 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms