RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 APOBEC3DQ96AK3 386 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 KIRREL1Q96J84 757 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 SIGLEC12Q96PQ1 595 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 PKIBQ9C010 78 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 MTCH1Q9NZJ7 389 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 CHTOPQ9Y3Y2 248 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 POLEQ07864 2286 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 AKAP6Q13023 2319 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 IGKV1-6A0A0C4DH72 117 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 KIAA1324LA8MWY0 1029 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 K7N7A8 449 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 HAX1O00165 279 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 RBMXL2O75526 392 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ARR3P36575 388 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 NPBWR2P48146 333 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 SOX8P57073 446 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 RAB5BP61020 215 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 SLAQ13239 276 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 SPATA46Q5T0L3 261 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF573Q86YE8 665 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 MKXQ8IYA7 352 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ZFP62Q8NB50 900 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 FDCSPQ8NFU4 85 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 OR52M1Q8NGK5 317 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 RIMS4Q9H426 269 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 PLK3Q9H4B4 646 aa6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 RALYQ9UKM9 306 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-244ENST00000627109 ESPL1Q14674 2120 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ROS1P08922 2347 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 C3orf85A0A1B0GTC6 90 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 FAM24AA6NFZ4 105 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 LIPFP07098 398 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 HNF1AP20823 631 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ID3Q02535 119 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 PRDX4Q13162 271 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ALKBH6Q3KRA9 238 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ADAM5Q6NVV9 412 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 OR5D13Q8NGL4 314 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ABHD17AQ96GS6 310 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 IP6K3Q96PC2 410 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 TTTY12Q9BZ98 90 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 B4GALT7Q9UBV7 327 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 A6NNC1 897 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 COLCA2A8K830 154 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 CRYBA1P05813 215 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 CTXN2P0C2S0 81 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 BCL3P20749 454 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 NKX2-1P43699 371 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 UCNP55089 124 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 SLC35G3Q8N808 338 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 OR2G3Q8NGZ4 309 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 MRPL30Q8TCC3 161 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 DPF1Q92782 380 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 TOLLIPQ9H0E2 274 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 BIN3Q9NQY0 253 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 PPP1R14DQ9NXH3 145 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 RNF115Q9Y4L5 304 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 LRRK2Q5S007 2527 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 TRAV39A0A0B4J263 110 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF732B4DXR9 585 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 SERPINE2P07093 398 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 OR2B8PP59922 312 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 GUSBP1Q15486 140 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 TSC22D1Q15714 1073 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF324BQ6AW86 544 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 ZDHHC23Q8IYP9 409 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 CMTM1Q8IZ96 169 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 NHLRC2Q8NBF2 726 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 LYRM2Q9NU23 88 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 MPC1Q9Y5U8 109 aa6.1□□□□□ -1.43
CTNNA1-244ENST00000627109 FLNBO75369 2602 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 ICE1Q9Y2F5 2266 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 A0A1B0GWJ7 208 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 SLC22A20A6NK97 555 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 OR5B21A6NL26 309 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 UMAD1C9J7I0 102 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 H0Y980 276 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 IGLV2-14P01704 120 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 ERVK11-1P61568 191 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 GUK1Q16774 197 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 HAGHQ16775 308 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF295-AS1Q8N0V1 137 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 ZADH2Q8N4Q0 377 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF488Q96MN9 340 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 HS3ST6Q96QI5 342 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 C12orf57Q99622 126 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 PBDC1Q9BVG4 233 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 HES7Q9BYE0 225 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 SH3BGRL3Q9H299 93 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 ESRP2Q9H6T0 727 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 SMCO4Q9NRQ5 59 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 ZNF175Q9Y473 711 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 A0A1W2PR80 420 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 NKX2-6A6NCS4 301 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 WNT5AP41221 380 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 RNF212Q495C1 297 aa6.09□□□□□ -1.43
CTNNA1-244ENST00000627109 Q6P435 159 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms