RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 FAM90A12PA8MX19 464 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 FAM90A5PA8MXJ8 464 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 FAM90A23PA8MXZ1 464 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 SRSF10O75494 262 aaKnown RBP15.3■□□□□ 0.04
FARP1-242ENST00000627049 FAM90A15PP0C7V4 464 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 FAM90A13PP0C7W8 464 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 FAM90A14PP0C7W9 464 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 FAM90A24PP0C7X0 464 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 CCL3P10147 92 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 PSG4Q00888 419 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 C9orf50Q5SZB4 431 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 SPNS3Q6ZMD2 512 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 GTF2H5Q6ZYL4 71 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 WFIKKN1Q96NZ8 548 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 ZSWIM8A7E2V4 1837 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 HELTA6NFD8 242 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 NKX6-3A6NJ46 265 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 J3QT63 122 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 DNPH1O43598 174 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 OR4B1Q8NGF8 309 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 H1FXQ92522 213 aaKnown RBP15.3■□□□□ 0.04
FARP1-242ENST00000627049 C5orf67F2Z3F1 127 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 CD99P14209 185 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 CYB5R2Q6BCY4 276 aa15.3■□□□□ 0.04
FARP1-242ENST00000627049 GMPPAQ96IJ6 420 aaPredicted RBP15.3■□□□□ 0.04
FARP1-242ENST00000627049 TMEM250H0YL14 139 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 STARD6P59095 220 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 PSG5Q15238 335 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 ZNF818PQ6ZRF7 136 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 PSMG3Q9BT73 122 aaPredicted RBP15.29■□□□□ 0.04
FARP1-242ENST00000627049 IL11RAQ14626 422 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 SPRED2Q7Z698 418 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 HSD17B10Q99714 261 aaKnown RBP15.29■□□□□ 0.04
FARP1-242ENST00000627049 FAM173AQ9BQD7 235 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 YTHDF2Q9Y5A9 579 aaKnown RBP15.29■□□□□ 0.04
FARP1-242ENST00000627049 SLC22A20A6NK97 555 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 LIFP15018 202 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 TRAT1Q6PIZ9 186 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 RCC1LQ96I51 464 aaKnown RBP15.29■□□□□ 0.04
FARP1-242ENST00000627049 ATG101Q9BSB4 218 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 TECRQ9NZ01 308 aaKnown RBP15.29■□□□□ 0.04
FARP1-242ENST00000627049 HEATR5BQ9P2D3 2071 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 ZNF124Q15973 351 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 FAM166AQ6J272 317 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 WDR74Q6RFH5 385 aaPredicted RBP15.29■□□□□ 0.04
FARP1-242ENST00000627049 CLDND2Q8NHS1 167 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 TXNDC17Q9BRA2 123 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 NDUFAF3Q9BU61 184 aa15.29■□□□□ 0.04
FARP1-242ENST00000627049 DMWDQ09019 674 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 GSX1Q9H4S2 264 aaPredicted RBP15.28■□□□□ 0.04
FARP1-242ENST00000627049 BRWD3Q6RI45 1802 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 A0A0J9YW62 118 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 COL10A1Q03692 680 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 RNF122Q9H9V4 155 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 CD1BP29016 333 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 HIST3H3Q16695 136 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 FA2HQ7L5A8 372 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 C1QL4Q86Z23 238 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 OOEPA6NGQ2 149 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 RNPS1Q15287 305 aaKnown RBP15.28■□□□□ 0.04
FARP1-242ENST00000627049 SCCPDHQ8NBX0 429 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 ZNF488Q96MN9 340 aa15.28■□□□□ 0.04
FARP1-242ENST00000627049 SERTM2A0A1B0GWG4 89 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 A0A1W2PPE3 182 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 IL3RAP26951 378 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 CD82P27701 267 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 STPG1Q5TH74 334 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 CPEB3Q8NE35 698 aaKnown RBP15.27■□□□□ 0.04
FARP1-242ENST00000627049 ZNF738Q8NE65 137 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 TMEM191AQ9H0A3 160 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 CDIPTO14735 213 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 LDLRAD4O15165 306 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 IZUMO4Q1ZYL8 232 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 TMEM204Q9BSN7 226 aa15.27■□□□□ 0.04
FARP1-242ENST00000627049 MTCL1Q9Y4B5 1905 aaKnown RBP15.27■□□□□ 0.03
FARP1-242ENST00000627049 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.03
FARP1-242ENST00000627049 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.03
FARP1-242ENST00000627049 SDF2L1Q9HCN8 221 aa15.27■□□□□ 0.03
FARP1-242ENST00000627049 K7N7A8 449 aa15.27■□□□□ 0.03
FARP1-242ENST00000627049 CEACAM21Q3KPI0 293 aa15.27■□□□□ 0.03
FARP1-242ENST00000627049 CYP2G1PQ6ZSU1 146 aa15.27■□□□□ 0.03
FARP1-242ENST00000627049 ABHD14AQ9BUJ0 271 aa15.27■□□□□ 0.03
FARP1-242ENST00000627049 MT-ND6P03923 174 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 ABHD3Q8WU67 409 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 ZNF501Q96CX3 271 aaPredicted RBP15.26■□□□□ 0.03
FARP1-242ENST00000627049 ICAM4Q14773 271 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 HERPUD1Q15011 391 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 OR5R1Q8NH85 324 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 DEFA4P12838 97 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 SUPT4H1P63272 117 aaKnown RBP15.26■□□□□ 0.03
FARP1-242ENST00000627049 FGFRL1Q8N441 504 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 UQCR10Q9UDW1 63 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 DYNLRB1Q9NP97 96 aa15.26■□□□□ 0.03
FARP1-242ENST00000627049 TRGV10A0A0A0MS01 117 aa15.25■□□□□ 0.03
FARP1-242ENST00000627049 LRRC30A6NM36 301 aa15.25■□□□□ 0.03
FARP1-242ENST00000627049 FAM90A26D6RGX4 464 aa15.25■□□□□ 0.03
FARP1-242ENST00000627049 NDUFS6O75380 124 aaKnown RBP15.25■□□□□ 0.03
FARP1-242ENST00000627049 UBE2L3P68036 154 aaKnown RBP15.25■□□□□ 0.03
FARP1-242ENST00000627049 HLA-BQ31612 363 aa15.25■□□□□ 0.03
FARP1-242ENST00000627049 SPATA45Q537H7 98 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms