RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ANXA10Q9UJ72 324 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 TMEM30CPA0ZSE6 113 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 BTBD17A6NE02 478 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 AMY2AP04746 511 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 MDKP21741 143 aaPredicted RBP10.3□□□□□ -0.76
PNKP-217ENST00000625216 KCNJ3P48549 501 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 RAG2P55895 527 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 TAS2R46P59540 309 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 RPL31P62899 125 aaKnown RBP10.3□□□□□ -0.76
PNKP-217ENST00000625216 HLA-DRB3P79483 266 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 PAX5Q02548 391 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 EDDM3AQ14507 147 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 MEF2DQ14814 521 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 GRK1Q15835 563 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 MIDNQ504T8 468 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 ACTBL2Q562R1 376 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 VAX1Q5SQQ9 334 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 SLC35E4Q6ICL7 350 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 ZNF782Q6ZMW2 699 aaPredicted RBP10.3□□□□□ -0.76
PNKP-217ENST00000625216 Q6ZS49 121 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 FAM185AQ8N0U4 392 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 TPRX1Q8N7U7 411 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 DUSP18Q8NEJ0 188 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 OR51S1Q8NGJ8 323 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 OR5H2Q8NGV7 314 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 CCDC107Q8WV48 283 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 RIMS4Q9H426 269 aaPredicted RBP10.3□□□□□ -0.76
PNKP-217ENST00000625216 HEXA-AS1Q9H8Q6 139 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 C1RLQ9NZP8 487 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 KIF25Q9UIL4 384 aa10.3□□□□□ -0.76
PNKP-217ENST00000625216 K7N7A8 449 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 MGST3O14880 152 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 GPR137BO60478 399 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 TK1P04183 234 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 TCRBP04435 133 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 GSTT2P0CG29 244 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 RCC1P18754 421 aaPredicted RBP10.29□□□□□ -0.76
PNKP-217ENST00000625216 GLIPR1P48060 266 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 AESQ08117 197 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 CDK10Q15131 360 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 HMGN3Q15651 99 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 SRSF7Q16629 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
PNKP-217ENST00000625216 KRBOX4Q5JUW0 171 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 PRR31Q5SQ13 230 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 TMEM200BQ69YZ2 307 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 MOB1BQ7L9L4 216 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 OR13C8Q8NGS7 320 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 OR5R1Q8NH85 324 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 PPP1R35Q8TAP8 253 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 MRGPRFQ96AM1 343 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 C19orf12Q9NSK7 152 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
PNKP-217ENST00000625216 SLC2A8Q9NY64 477 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 EHFQ9NZC4 300 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 ZNRD1Q9P1U0 126 aa10.29□□□□□ -0.76
PNKP-217ENST00000625216 hCG_2014768A0A024R1R8 64 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 IGKV1-6A0A0C4DH72 117 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 CLPSL1A2RUU4 121 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 DISC1C4P0D8 188 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 SDCBPO00560 298 aaPredicted RBP10.28□□□□□ -0.76
PNKP-217ENST00000625216 FABP7O15540 132 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 NDUFB6O95139 128 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 SCTP09683 121 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 OMGP23515 440 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 SAA4P35542 130 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 P2RX3P56373 397 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 ARPC4P59998 168 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 HERPUD1Q15011 391 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 PLET1Q6UQ28 207 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 OVCH2Q7RTZ1 564 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 OR13A1Q8NGR1 328 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 NUDT15Q9NV35 164 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 TRAPPC2LQ9UL33 140 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 MGAM2Q2M2H8 2515 aa10.28□□□□□ -0.76
PNKP-217ENST00000625216 MEIKINA0A087WXM9 373 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 A0A0B4J293 547 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 ODAMA1E959 279 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 MEX3AA1L020 520 aaKnown RBP10.27□□□□□ -0.77
PNKP-217ENST00000625216 TRDCB7Z8K6 153 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 KIR2DS4P43632 304 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 OR3A3P47888 321 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 RELBQ01201 579 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 KLRD1Q13241 179 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 KIR2DS1Q14954 304 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 AANATQ16613 207 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 SCGB2B2Q4G0G5 96 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 IGSF11Q5DX21 431 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 ZNF660Q6AZW8 331 aaPredicted RBP10.27□□□□□ -0.77
PNKP-217ENST00000625216 TCF23Q7RTU1 214 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 ARRDC1Q8N5I2 433 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 C11orf42Q8N5U0 333 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 BEND2Q8NDZ0 799 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 UBALD1Q8TB05 177 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 GINS4Q9BRT9 223 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 CABLES2Q9BTV7 478 aa10.27□□□□□ -0.77
PNKP-217ENST00000625216 FXYD6Q9H0Q3 95 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms