RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 C20orf204Q6ZNR8 217 aa16.46■□□□□ 0.23
LAPTM4B-204ENST00000619747 UBALD1Q8TB05 177 aa16.46■□□□□ 0.23
LAPTM4B-204ENST00000619747 SLC25A40Q8TBP6 338 aa16.46■□□□□ 0.23
LAPTM4B-204ENST00000619747 GNG3P63215 75 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 CYCSP99999 105 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 GABRA6Q16445 453 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 SLC2A9Q9NRM0 540 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 CRYM-AS1A6NIL9 109 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 SMPD2O60906 423 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 TAGLN2P37802 199 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 SOHLH1Q5JUK2 328 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 TMEM268Q5VZI3 342 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 CNTNAP3Q9BZ76 1288 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 GP6Q9HCN6 339 aa16.45■□□□□ 0.22
LAPTM4B-204ENST00000619747 H0YL77 283 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 C1QL1O75973 258 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 GRPP07492 148 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 TMEM211Q6ICI0 200 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 Q6ZT83 130 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 SARAFQ96BY9 339 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 C2orf50Q96LR7 162 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 C1orf123Q9NWV4 160 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 SPTA1P02549 2419 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 CDIPTO14735 213 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 SPIN3Q5JUX0 258 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 SAPCD1Q5SSQ6 148 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 MEX3BQ6ZN04 569 aaKnown RBP16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 LYZL2Q7Z4W2 148 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 WDR86Q86TI4 376 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 ZGRF1Q86YA3 2104 aa16.44■□□□□ 0.22
LAPTM4B-204ENST00000619747 ZNF891A8MT65 544 aaPredicted RBP16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 CEACAM1P13688 526 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 HERV-K104P61576 105 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 ZNF573Q86YE8 665 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 RPRMLQ8N4K4 120 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 ZADH2Q8N4Q0 377 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 SUMF2Q8NBJ7 301 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 MPC1Q9Y5U8 109 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 LINC00614P0C842 121 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 MPV17P39210 176 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 FAM58AQ8N1B3 248 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 RAB39BQ96DA2 213 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 RARRES2Q99969 163 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 AQP7O14520 342 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 PPYP01298 95 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 PGA5P0DJD9 388 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 HOXC12P31275 282 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 UCP2P55851 309 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 PSG7Q13046 419 aa16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 MRPL49Q13405 166 aaKnown RBP16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 LSM5Q9Y4Y9 91 aaKnown RBP16.43■□□□□ 0.22
LAPTM4B-204ENST00000619747 PLCE1Q9P212 2302 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 DVL1O14640 695 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 FABP6P51161 128 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 ARSJQ5FYB0 599 aaPredicted RBP16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 ETFRF1Q6IPR1 90 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 POC1AQ8NBT0 407 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 Q8NFD4 153 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 DECR2Q9NUI1 292 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 DKK4Q9UBT3 224 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 PHF1O43189 567 aaPredicted RBP16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 SCAF4O95104 1147 aaKnown RBP16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 DIRAS3O95661 229 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 HERPUD1Q15011 391 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 HSD17B11Q8NBQ5 300 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 IL1F10Q8WWZ1 152 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 OR51I2Q9H344 312 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 NBASA2RRP1 2371 aa16.42■□□□□ 0.22
LAPTM4B-204ENST00000619747 TRAV24A0A0B4J272 114 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 SIRPB1O00241 398 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 CAMLGP49069 296 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 ACSF3Q4G176 576 aaPredicted RBP16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 SCCPDHQ8NBX0 429 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 NAA60Q9H7X0 242 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 Q9N2K0 584 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 FBXL17Q9UF56 701 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 RELNP78509 3460 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 WDR1O75083 606 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 CRYABP02511 175 aaKnown RBP16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 AMBPP02760 352 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 OR4A8P0C604 315 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 MDKP21741 143 aaPredicted RBP16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 GAGE1Q13065 139 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 HNF4GQ14541 408 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 ZNF826PQ6ZT77 177 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 MOB3AQ96BX8 217 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 GLRX2Q9NS18 164 aa16.41■□□□□ 0.22
LAPTM4B-204ENST00000619747 OR5B21A6NL26 309 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 H3BQ15 152 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 TNFSF12O43508 249 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 ZNF154Q13106 437 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 NCR3LG1Q68D85 454 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 SAXO1Q8IYX7 474 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 KLF14Q8TD94 323 aaPredicted RBP16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 TP53RKQ96S44 253 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 OBP2BQ9NPH6 170 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 IGKV1D-13A0A0B4J2D9 117 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 NAPSAO96009 420 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 TFF1P04155 84 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 IGKV1-13P0DP09 117 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms