RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CD300LB	A8K4G0	201 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	SYNGR4	O95473	234 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	BCL2	P10415	239 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	REL	Q04864	619 aa	Predicted RBP	12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	SPANXN5	Q5MJ07	72 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	ABLIM2	Q6H8Q1	611 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	CLDN23	Q96B33	292 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	GPR146	Q96CH1	333 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	SRD5A3	Q9H8P0	318 aa		12.33	□□□□□ -0.44
SMTN-223	ENST00000619644	ANKRD30BL	A7E2S9	258 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	DNPH1	O43598	174 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	CEACAM1	P13688	526 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	TAS2R30	P59541	319 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	DCAF12	Q5T6F0	453 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	RIPPLY2	Q5TAB7	128 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	OR8G2P	Q6IF36	304 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	ATP5S	Q99766	215 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	CISD1	Q9NZ45	108 aa	Known RBP	12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	RHBDL1	O75783	438 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	GCG	P01275	180 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	TUBG1	P23258	451 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	F2R	P25116	425 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	PLA2G5	P39877	138 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	CLN3	Q13286	438 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	CLEC12B	Q2HXU8	276 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	CEACAM21	Q3KPI0	293 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	DPPA3	Q6W0C5	159 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	NECAP1	Q8NC96	275 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	SIGLEC12	Q96PQ1	595 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	VSIR	Q9H7M9	311 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	ATP23	Q9Y6H3	246 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	SOX15	O60248	233 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	OR4A8	P0C604	315 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	MAGEA5	P43359	124 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	TECTB	Q96PL2	329 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	REPIN1	Q9BWE0	567 aa	Known RBP	12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	PRDM14	Q9GZV8	571 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	HIPK2	Q9H2X6	1198 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	PLSCR2	Q9NRY7	297 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	PPP1R14D	Q9NXH3	145 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	TAAR3P	Q9P1P4	343 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	TRAPPC2L	Q9UL33	140 aa		12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	BOK	Q9UMX3	212 aa	Predicted RBP	12.32	□□□□□ -0.44
SMTN-223	ENST00000619644	KIAA1549	Q9HCM3	1950 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	SFTPC	P11686	197 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	UCP1	P25874	307 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	HOXA6	P31267	233 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	BAX	Q07812	192 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	NMS	Q5H8A3	153 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	ZNF787	Q6DD87	383 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	CT55	Q8WUE5	264 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	ADGRG7	Q96K78	797 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	RNF150	Q9ULK6	438 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	LAMP3	Q9UQV4	416 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	SVIL	O95425	2214 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	TRAV1-1	A0A0B4J248	108 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	CEBPZOS	A8MTT3	80 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	DEGS1	O15121	323 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	DUSP3	P51452	185 aa	Predicted RBP	12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	ID3	Q02535	119 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	CBLN4	Q9NTU7	201 aa		12.31	□□□□□ -0.44
SMTN-223	ENST00000619644	RBMXL2	O75526	392 aa	Known RBP	12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	NAPSA	O96009	420 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	ABHD17B	Q5VST6	288 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	APH1A	Q96BI3	265 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	CTDSP1	Q9GZU7	261 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	RPRM	Q9NS64	109 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	PSENEN	Q9NZ42	101 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	SELE	P16581	610 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	ERVS71-1	P61550	626 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	ADIRF	Q15847	76 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	COA6	Q5JTJ3	125 aa	Known RBP	12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	ZNF66	Q6ZN08	573 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644		Q6ZRM9	215 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	TIPARP	Q7Z3E1	657 aa	Known RBP	12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	FAM58A	Q8N1B3	248 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	OR2W1	Q9Y3N9	320 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	ZNF25	P17030	456 aa	Predicted RBP	12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	PAX5	Q02548	391 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	C16orf82	Q7Z2V1	217 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	OR5T1	Q8NG75	326 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	LOXL2	Q9Y4K0	774 aa		12.3	□□□□□ -0.44
SMTN-223	ENST00000619644	PRR14L	Q5THK1	2151 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	PAX9	P55771	341 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	IL24	Q13007	206 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	PMS2P11	Q13670	270 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	TESK1	Q15569	626 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	MRPL30	Q8TCC3	161 aa	Known RBP	12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	GTF3C1	Q12789	2109 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	MED12L	Q86YW9	2145 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	MED13	Q9UHV7	2174 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644		H0Y980	276 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	PFN1	P07737	140 aa	Known RBP	12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	CTXN2	P0C2S0	81 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	OR5D13	Q8NGL4	314 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	PLPPR1	Q8TBJ4	325 aa		12.29	□□□□□ -0.44
SMTN-223	ENST00000619644	SPSB4	Q96A44	273 aa		12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms