RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 C9orf152Q5JTZ5 239 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 ZNF880Q6PDB4 577 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 THNSL2Q86YJ6 484 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 TGIF2LXQ8IUE1 241 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 ST6GALNAC6Q969X2 333 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 CHCHD6Q9BRQ6 235 aa12.74□□□□□ -0.37
BRCA1-228ENST00000618469 RIMS4Q9H426 269 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-228ENST00000618469 LOC100506127A0A0U1RQW1 187 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 M0QZK8 103 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 TXNL1O43396 289 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 RGS11O94810 467 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 AMY1AP04745 511 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 AMY2AP04746 511 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 SLC2A2P11168 524 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-228ENST00000618469 GADD45AP24522 165 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 ZNF137PP52743 207 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 TMEM50BP56557 158 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 MOGAT2Q3SYC2 334 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 PLAC9Q5JTB6 97 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 IZUMO1Q8IYV9 350 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 OR2AK2Q8NG84 335 aa12.73□□□□□ -0.37
BRCA1-228ENST00000618469 CMSS1Q9BQ75 279 aaKnown RBP12.73□□□□□ -0.37
BRCA1-228ENST00000618469 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 NOTOA8MTQ0 251 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 TNFAIP8O95379 198 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 CD36P16671 472 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 RAB6AP20340 208 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 STEAP3Q658P3 488 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 RAB3CQ96E17 227 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 KCTD7Q96MP8 289 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 WNT10AQ9GZT5 417 aa12.72□□□□□ -0.37
BRCA1-228ENST00000618469 A0A075B6Q4 140 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 YPEL1O60688 119 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 CSF1P09603 554 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 CD28P10747 220 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 MRPS15P82914 257 aaKnown RBP12.71□□□□□ -0.37
BRCA1-228ENST00000618469 MXD1Q05195 221 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 TPRA1Q86W33 373 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 C5orf56Q8N8D9 126 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 OR10R2Q8NGX6 335 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 WIPF2Q8TF74 440 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-228ENST00000618469 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-228ENST00000618469 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 RNF167Q9H6Y7 350 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 Q9N2K0 584 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 VCX3AQ9NNX9 186 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 DAPK2Q9UIK4 370 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 MGAT4AQ9UM21 535 aa12.71□□□□□ -0.37
BRCA1-228ENST00000618469 SAA2-SAA4A0A096LPE2 208 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 ZNF736B4DX44 427 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-228ENST00000618469 ST8SIA5O15466 376 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 FGF16O43320 207 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 LANCL1O43813 399 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 CD3GP09693 182 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 SAA2P0DJI9 122 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-228ENST00000618469 GNB3P16520 340 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 CD1BP29016 333 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 SDC2P34741 201 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 LSAMPQ13449 338 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 SFXN4Q6P4A7 337 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 TSPAN14Q8NG11 270 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 OR2T10Q8NGZ9 312 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 LGALS14Q8TCE9 139 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 MRPL20Q9BYC9 149 aaKnown RBP12.7□□□□□ -0.38
BRCA1-228ENST00000618469 PARP12Q9H0J9 701 aaKnown RBP12.7□□□□□ -0.38
BRCA1-228ENST00000618469 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 OR1A1Q9P1Q5 309 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 KCNK7Q9Y2U2 307 aa12.7□□□□□ -0.38
BRCA1-228ENST00000618469 A0A087WXM4 84 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 METTL21EPA6NDL7 271 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
BRCA1-228ENST00000618469 G3V4G9 280 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 RAB27BO00194 218 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 MFNGO00587 321 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 HSPA12AO43301 675 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 CLEC2LP0C7M8 214 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 HIST1H1DP16402 221 aaKnown RBP12.69□□□□□ -0.38
BRCA1-228ENST00000618469 OR3A3P47888 321 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 EBI3Q14213 229 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 LY6G6FQ5SQ64 297 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 Q8N6K4 173 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 PTX4Q96A99 478 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
BRCA1-228ENST00000618469 CENPOQ9BU64 300 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 ATG5Q9H1Y0 275 aa12.69□□□□□ -0.38
BRCA1-228ENST00000618469 MOSP00540 346 aa12.68□□□□□ -0.38
BRCA1-228ENST00000618469 FCGR3AP08637 254 aa12.68□□□□□ -0.38
BRCA1-228ENST00000618469 SCTP09683 121 aa12.68□□□□□ -0.38
BRCA1-228ENST00000618469 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
BRCA1-228ENST00000618469 TIMM50Q3ZCQ8 353 aa12.68□□□□□ -0.38
BRCA1-228ENST00000618469 ZNF833PQ6ZTB9 187 aa12.68□□□□□ -0.38
BRCA1-228ENST00000618469 OR5AU1Q8NGC0 362 aa12.68□□□□□ -0.38
BRCA1-228ENST00000618469 MAFIPQ8WZ33 124 aa12.68□□□□□ -0.38
BRCA1-228ENST00000618469 CITED2Q99967 270 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-228ENST00000618469 SERPINE3A8MV23 424 aa12.67□□□□□ -0.38
BRCA1-228ENST00000618469 ZBTB25P24278 435 aa12.67□□□□□ -0.38
BRCA1-228ENST00000618469 ARFRP1Q13795 201 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms