RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 TSPAN14Q8NG11 270 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 OR10R2Q8NGX6 335 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 OR2T10Q8NGZ9 312 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 RAB3CQ96E17 227 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 CMSS1Q9BQ75 279 aaKnown RBP12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 ABHD14AQ9BUJ0 271 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 Q9N2K0 584 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 KCNK7Q9Y2U2 307 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
SRGAP2C-205ENST00000617209 TMEM127O75204 238 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 IGKV1D-33P01593 117 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 IGKV1-33P01594 117 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 SLC2A2P11168 524 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 TMEM11P17152 192 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 GADD45AP24522 165 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 VDAC2P45880 294 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 GNMTQ14749 295 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 LYG1Q8N1E2 194 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 CHCHD6Q9BRQ6 235 aa12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 HDHD3Q9BSH5 251 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2C-205ENST00000617209 TRIM64CA6NLI5 447 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 SERPINE3A8MV23 424 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 MFNGO00587 321 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 PEX14O75381 377 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 ZBTB25P24278 435 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 SDC2P34741 201 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 HLA-DRB3P79483 266 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 SRSF7Q16629 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 C2orf68Q2NKX9 166 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 MOGAT2Q3SYC2 334 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 C5orf56Q8N8D9 126 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 SETD6Q8TBK2 473 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 IL1F10Q8WWZ1 152 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 MMP27Q9H306 513 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 VCX3AQ9NNX9 186 aa12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRGAP2C-205ENST00000617209 A0A0B4J203 849 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 TRDCB7Z8K6 153 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 DIRAS3O95661 229 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 MOSP00540 346 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 CD3GP09693 182 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 HIST1H1DP16402 221 aaKnown RBP12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 SCAND1P57086 179 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 HNF4GQ14541 408 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 FAM71F2Q6NXP2 309 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 SFXN4Q6P4A7 337 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 ZNF833PQ6ZTB9 187 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 EDARADDQ8WWZ3 215 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 AGMATQ9BSE5 352 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 CENPOQ9BU64 300 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 TOLLIPQ9H0E2 274 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 PLSCR3Q9NRY6 295 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 PIPOXQ9P0Z9 390 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 SLC23A1Q9UHI7 598 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 DAPK2Q9UIK4 370 aa12.29□□□□□ -0.44
SRGAP2C-205ENST00000617209 IGHV3-72A0A0B4J1Y9 119 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 LOC100506127A0A0U1RQW1 187 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 RAB29O14966 203 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 FBXO24O75426 580 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 SCGNO76038 276 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 IGHG2P01859 326 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 SCTP09683 121 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 MRPS15P82914 257 aaKnown RBP12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 KIR2DS1Q14954 304 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 TMEM95Q3KNT9 176 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 Q6ZS49 121 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 OR5AU1Q8NGC0 362 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 OR4A4PQ8NGN8 299 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 YIPF6Q96EC8 236 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 ATG5Q9H1Y0 275 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 IFI27L2Q9H2X8 130 aa12.28□□□□□ -0.44
SRGAP2C-205ENST00000617209 SMIM30A4D0T7 59 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 ZNF736B4DX44 427 aaPredicted RBP12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 CSF1P09603 554 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 CD28P10747 220 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 GNB3P16520 340 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 CEACAM6P40199 344 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 SERPINB10P48595 397 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 CD83Q01151 205 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 LSAMPQ13449 338 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 C11orf44Q8N8P7 122 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 S1PR3Q99500 378 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 NABP2Q9BQ15 211 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 ZNF251Q9BRH9 671 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 C11orf54Q9H0W9 315 aaPredicted RBP12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 RNF167Q9H6Y7 350 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 LIN7CQ9NUP9 197 aaKnown RBP12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 NOTCH1P46531 2555 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 MEGF8Q7Z7M0 2845 aa12.27□□□□□ -0.45
SRGAP2C-205ENST00000617209 SAA2-SAA4A0A096LPE2 208 aa12.26□□□□□ -0.45
SRGAP2C-205ENST00000617209 IGKV1-6A0A0C4DH72 117 aa12.26□□□□□ -0.45
SRGAP2C-205ENST00000617209 HSPA12AO43301 675 aa12.26□□□□□ -0.45
SRGAP2C-205ENST00000617209 FCGR3AP08637 254 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms