RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 LMF2Q9BU23 707 aaKnown RBP13.17□□□□□ -0.3
NOP56-220ENST00000616692 TRAV8-7A0A075B6U6 113 aa13.17□□□□□ -0.3
NOP56-220ENST00000616692 ZNF736B4DX44 427 aaPredicted RBP13.17□□□□□ -0.3
NOP56-220ENST00000616692 K7EP34 96 aa13.17□□□□□ -0.3
NOP56-220ENST00000616692 SAP18O00422 153 aaKnown RBP13.17□□□□□ -0.3
NOP56-220ENST00000616692 EID2BQ96D98 161 aa13.17□□□□□ -0.3
NOP56-220ENST00000616692 EFCAB11Q9BUY7 163 aa13.17□□□□□ -0.3
NOP56-220ENST00000616692 MUC21A0A0G2JKD1 596 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 MUC21A0A140T8X8 626 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 ANKRD30BLA7E2S9 258 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 F8WDY8 70 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 VENTXO95231 258 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 GPM6AP51674 278 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 RPS11P62280 158 aaKnown RBP eCLIP13.16□□□□□ -0.3
NOP56-220ENST00000616692 RPL24P83731 157 aaKnown RBP13.16□□□□□ -0.3
NOP56-220ENST00000616692 CLEC12AQ5QGZ9 265 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 MUC21Q5SSG8 566 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 SMIM19Q96E16 107 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 SAMD10Q9BYL1 202 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 PPDPFQ9H3Y8 114 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 PDFQ9HBH1 243 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 SERTAD4Q9NUC0 356 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 TDRD6O60522 2096 aaKnown RBP13.16□□□□□ -0.3
NOP56-220ENST00000616692 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 PSMB11A5LHX3 300 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 TMEM189A5PLL7 270 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 UTS2O95399 124 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 P2RY1P47900 373 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 FAM78BQ5VT40 261 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 POC1AQ8NBT0 407 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 OR2T10Q8NGZ9 312 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 TSACCQ96A04 125 aaPredicted RBP13.16□□□□□ -0.3
NOP56-220ENST00000616692 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 C2orf50Q96LR7 162 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 SH3BGRL3Q9H299 93 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 TMED7Q9Y3B3 224 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 RNF114Q9Y508 228 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 GPR137BO60478 399 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 PGCP20142 388 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 SLC6A6P31641 620 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 RRADP55042 308 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 RPL15P61313 204 aaKnown RBP13.16□□□□□ -0.3
NOP56-220ENST00000616692 OR4L1Q8NH43 312 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 DNAJA3Q96EY1 480 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 FBLN5Q9UBX5 448 aa13.16□□□□□ -0.3
NOP56-220ENST00000616692 TRAV38-1A0A0B4J264 116 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 J3QR89 54 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 CGAP01215 116 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 HBZP02008 142 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 CELA2BP08218 269 aaPredicted RBP13.15□□□□□ -0.3
NOP56-220ENST00000616692 GNG4P50150 75 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 LINC00310P59036 64 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 MARCH1Q8TCQ1 289 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 HCAR1Q9BXC0 346 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 LRIT1Q9P2V4 623 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 MYO18BQ8IUG5 2567 aa13.15□□□□□ -0.3
NOP56-220ENST00000616692 FAM72CH0Y354 149 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 F2RL2O00254 374 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 CEACAM4O75871 244 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 AGFG2O95081 481 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 NPBWR2P48146 333 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 LCN6P62502 163 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 FAM72AQ5TYM5 149 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 FAM72DQ6L9T8 149 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 FAM72BQ86X60 149 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 ZNF595Q8IYB9 648 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 CSNK1A1LQ8N752 337 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 FNDC9Q8TBE3 224 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 PIGTQ969N2 578 aa13.15□□□□□ -0.31
NOP56-220ENST00000616692 ZMYND19Q96E35 227 aaPredicted RBP13.15□□□□□ -0.31
NOP56-220ENST00000616692 HINT3Q9NQE9 182 aaKnown RBP13.15□□□□□ -0.31
NOP56-220ENST00000616692 SH2D1BO14796 132 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 PIN1P1O15428 100 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 TAPBPO15533 448 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 SFT2D2O95562 160 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 HLA-HP01893 362 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 ADH4P08319 380 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 EPORP19235 508 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 YPEL3P61236 119 aaPredicted RBP13.14□□□□□ -0.31
NOP56-220ENST00000616692 CDK5R1Q15078 307 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 ADIRFQ15847 76 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 C12orf54Q6X4T0 127 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 FOXI2Q6ZQN5 318 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 CENPVQ7Z7K6 275 aaPredicted RBP13.14□□□□□ -0.31
NOP56-220ENST00000616692 ERRFI1Q9UJM3 462 aaPredicted RBP13.14□□□□□ -0.31
NOP56-220ENST00000616692 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 TENM4Q6N022 2769 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 FLNBO75369 2602 aaKnown RBP13.14□□□□□ -0.31
NOP56-220ENST00000616692 CYB5AP00167 134 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 ZNF708P17019 499 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 NHLRC2Q8NBF2 726 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 CLDND2Q8NHS1 167 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 FNDC4Q9H6D8 234 aaPredicted RBP13.14□□□□□ -0.31
NOP56-220ENST00000616692 PHPT1Q9NRX4 125 aaPredicted RBP13.14□□□□□ -0.31
NOP56-220ENST00000616692 PXMP4Q9Y6I8 212 aa13.14□□□□□ -0.31
NOP56-220ENST00000616692 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
NOP56-220ENST00000616692 SERF1AO75920 110 aa13.13□□□□□ -0.31
NOP56-220ENST00000616692 RCBTB2O95199 551 aa13.13□□□□□ -0.31
NOP56-220ENST00000616692 NUDT3O95989 172 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms