RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 HES3Q5TGS1 186 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 MRPL30Q8TCC3 161 aaKnown RBP12.33□□□□□ -0.44
EPHB4-210ENST00000616502 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 C18orf12Q96KH6 178 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 ANGPTL4Q9BY76 406 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 PARD6AQ9NPB6 346 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 USF3Q68DE3 2245 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 LOC102723971A0A1B0GUV8 181 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 MDFIC2A0A1B0GVS7 189 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 RBM11P57052 281 aaKnown RBP12.33□□□□□ -0.44
EPHB4-210ENST00000616502 ENDOGQ14249 297 aaKnown RBP12.33□□□□□ -0.44
EPHB4-210ENST00000616502 P2RY6Q15077 328 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 SPSB3Q6PJ21 355 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 CPT1CQ8TCG5 803 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 ZDHHC11Q9H8X9 412 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 RYDENQ9NUL5 291 aaKnown RBP12.33□□□□□ -0.44
EPHB4-210ENST00000616502 ABI3Q9P2A4 366 aa12.33□□□□□ -0.44
EPHB4-210ENST00000616502 ANKRD11Q6UB99 2663 aaPredicted RBP12.32□□□□□ -0.44
EPHB4-210ENST00000616502 A0A0J9YW62 118 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 ANKRD30BLA7E2S9 258 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 PAGE4O60829 102 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 RAC2P15153 192 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 CLDN23Q96B33 292 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 TMEM204Q9BSN7 226 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 PRDM13Q9H4Q3 707 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 PAM16Q9Y3D7 125 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 GJE1A6NN92 205 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 DEGS1O15121 323 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 FFAR4Q5NUL3 377 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 FIP1L1Q6UN15 594 aaKnown RBP12.32□□□□□ -0.44
EPHB4-210ENST00000616502 TIPARPQ7Z3E1 657 aaKnown RBP12.32□□□□□ -0.44
EPHB4-210ENST00000616502 MRGPRGQ86SM5 289 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 CALHM1Q8IU99 346 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 OR2Y1Q8NGV0 311 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 TMEM183AQ8IXX5 376 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 GPR146Q96CH1 333 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 GCM1Q9NP62 436 aa12.32□□□□□ -0.44
EPHB4-210ENST00000616502 TIMM8BQ9Y5J9 83 aaPredicted RBP12.32□□□□□ -0.44
EPHB4-210ENST00000616502 A0A087WWC5 75 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 IFITM10A6NMD0 228 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 CD55P08174 381 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 EIF3IQ13347 325 aaKnown RBP12.31□□□□□ -0.44
EPHB4-210ENST00000616502 DBX2Q6ZNG2 339 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.31□□□□□ -0.44
EPHB4-210ENST00000616502 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
EPHB4-210ENST00000616502 IL36RNQ9UBH0 155 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 IGKV1D-13A0A0B4J2D9 117 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 IGKV1-13P0DP09 117 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 PRDX4Q13162 271 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 IGFBP7Q16270 282 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 OR10G4Q8NGN3 311 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 OR10G9Q8NGN4 311 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 OR10G7Q8NGN6 311 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 ELOVL1Q9BW60 279 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 KCNIP1Q9NZI2 227 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 SYNGR4O95473 234 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 CTXN2P0C2S0 81 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 KITLGP21583 273 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 MAGEA5P43359 124 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 HTD2P86397 168 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 SRSF6Q13247 344 aaKnown RBP12.31□□□□□ -0.44
EPHB4-210ENST00000616502 PDLIM3Q53GG5 364 aaPredicted RBP12.31□□□□□ -0.44
EPHB4-210ENST00000616502 OR4C12Q96R67 309 aa12.31□□□□□ -0.44
EPHB4-210ENST00000616502 TRAV34A0A0B4J273 112 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 IGKV1-12A0A0C4DH73 117 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 OR6C6A6NF89 314 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 IGKV1D-12P01611 117 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 AMBPP02760 352 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 KRTDAPP60985 99 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 ZNF90Q03938 601 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 OR10P1Q8NGE3 313 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 OR10V1Q8NGI7 309 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 OR4D5Q8NGN0 318 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-210ENST00000616502 SERTAD4Q9NUC0 356 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 EDDM3BP56851 147 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 HIST1H3AP68431 136 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-210ENST00000616502 VHLLQ6RSH7 139 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 OR10D3Q8NH80 312 aa12.3□□□□□ -0.44
EPHB4-210ENST00000616502 PNRC2Q9NPJ4 139 aaKnown RBP12.3□□□□□ -0.44
EPHB4-210ENST00000616502 NPIPB13A6NJU9 1138 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 NPIPB4C9JG80 1138 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 UMODP07911 640 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 F2RP25116 425 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 PPP1CBP62140 327 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 MSMO1Q15800 293 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 ZNF664Q8N3J9 261 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
EPHB4-210ENST00000616502 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
EPHB4-210ENST00000616502 TXN2Q99757 166 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 PCED1AQ9H1Q7 454 aa12.29□□□□□ -0.44
EPHB4-210ENST00000616502 PSG4Q00888 419 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms