RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SEC11CQ9BY50 192 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 FER1L5A0AVI2 2057 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 ESPL1Q14674 2120 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 HOXD11P31277 338 aaPredicted RBP11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 CD200P41217 278 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 ID4P47928 161 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 HIST1H3AP68431 136 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 GUCA2BQ16661 112 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 KCNIP4Q6PIL6 250 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 TVP23CQ96ET8 276 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 TIMD4Q96H15 378 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 SLC35E1Q96K37 410 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 RNF126Q9BV68 326 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 SLC25A22Q9H936 323 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 H0YIZ8 118 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 DAOP14920 347 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 HLA-GP17693 338 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 ERHP84090 104 aaKnown RBP11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 RNF166Q96A37 237 aaPredicted RBP11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 SSX3Q99909 188 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 SAP30LQ9HAJ7 183 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 J3QW42 95 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 GLIPR1P48060 266 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 KRTCAP3Q53RY4 240 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 GAB2Q9UQC2 676 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 TECTAO75443 2155 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 SOX15O60248 233 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 CNIH1O95406 144 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 MARS2Q96GW9 593 aaKnown RBP11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 TMEM68Q96MH6 324 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 HSD17B10Q99714 261 aaKnown RBP11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 NRIP2Q9BQI9 281 aa11.24□□□□□ -0.61
PPP4R3B-206ENST00000616407 MDFIC2A0A1B0GVS7 189 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 MGST3O14880 152 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 CLDN14O95500 239 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 FGF2P09038 288 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 S100A12P80511 92 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 FAM24BQ8N5W8 94 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 CLN8Q9UBY8 286 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 MMP24Q9Y5R2 645 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 GNB1P62873 340 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 HTD2P86397 168 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 FOXL2NBQ6ZUU3 175 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 C1orf174Q8IYL3 243 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 FGFRL1Q8N441 504 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 ZNF581Q9P0T4 197 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 RPH3ALQ9UNE2 315 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 SPTBN1Q01082 2364 aaKnown RBP11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 MUC22E2RYF6 1773 aaPredicted RBP11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 H0YL77 283 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 CFPP27918 469 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 MPV17P39210 176 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 SRSF6Q13247 344 aaKnown RBP11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 STUMQ69YW2 141 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 OR4S2Q8NH73 311 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 CORO2AQ92828 525 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 CACFD1Q9UGQ2 172 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 KIAA2026Q5HYC2 2103 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 MYO7BQ6PIF6 2116 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 LGALS4P56470 323 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 PEAR1Q5VY43 1037 aaPredicted RBP11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 LHFPL1Q86WI0 220 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 ISOC2Q96AB3 205 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 CCL13Q99616 98 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 ZNF665Q9H7R5 613 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 TUBG2Q9NRH3 451 aa11.23□□□□□ -0.61
PPP4R3B-206ENST00000616407 PROB1E7EW31 1015 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 PITX3O75364 302 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 HFEQ30201 348 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 PUSL1Q8N0Z8 303 aaKnown RBP11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 RSRP1Q9BUV0 290 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 GAL3ST2Q9H3Q3 398 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 COL6A6A6NMZ7 2263 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 OR7C2O60412 319 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 ARG1P05089 322 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 WNT5AP41221 380 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 FHITP49789 147 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 SUPT4H1P63272 117 aaKnown RBP11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 CADP27708 2225 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 DEFA4P12838 97 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 TLNRD1Q9H1K6 362 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 SLC35D1Q9NTN3 355 aa11.22□□□□□ -0.61
PPP4R3B-206ENST00000616407 F8VVB4 439 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 F8VWA3 439 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 CEACAM1P13688 526 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms