RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 FAM90A10PA6NDY2 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A8PA6NJQ4 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A22PA8MWA6 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 TFF1P04155 84 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 SEC11BP0C7V7 166 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 DYNLT3P51808 116 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 UBE2NP61088 152 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 ZNF154Q13106 437 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 PEA15Q15121 130 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 TBC1D28Q2M2D7 210 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 PCSK4Q6UW60 755 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM180AQ6UWF9 173 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 CD300LFQ8TDQ1 290 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 RXFP4Q8TDU9 374 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 TMEM171Q8WVE6 324 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 S100PBPQ96BU1 408 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 GINS3Q9BRX5 216 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 PARD6AQ9NPB6 346 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 A0A0G2JRQ6 117 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 H0YL77 283 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 SS18L1O75177 396 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 CDS2O95674 445 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 TMEM50AO95807 157 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 DHRS7BQ6IAN0 325 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 ZNF383Q8NA42 475 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 SCCPDHQ8NBX0 429 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 MPC1Q9Y5U8 109 aa11.79□□□□□ -0.52
CACNA1C-231ENST00000616390 SERPINE2P07093 398 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 ATP6V0CP27449 155 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 TRIP6Q15654 476 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 WDR86Q86TI4 376 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 TMEM252Q8N6L7 170 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 NANOS1Q8WY41 292 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 RARRES2Q99969 163 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 OR51I2Q9H344 312 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 CDH20Q9HBT6 801 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 WDR1O75083 606 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 PMELP40967 661 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 SRPXP78539 464 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 HNF4GQ14541 408 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 OR1J1Q8NGS3 322 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 PLPPR1Q8TBJ4 325 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 SLC25A40Q8TBP6 338 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 ISOC2Q96AB3 205 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 OR2W1Q9Y3N9 320 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 RIF1Q5UIP0 2472 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 A0A1W2PPQ1 181 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 OR5B21A6NL26 309 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 UBE2CO00762 179 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 DLEU1O43261 78 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 CRYBA1P05813 215 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 PPP1CBP62140 327 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 TMEM267Q0VDI3 215 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 GAGE1Q13065 139 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM53AQ6NSI3 398 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 ZNF826PQ6ZT77 177 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 IP6K3Q96PC2 410 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 CLCC1Q96S66 551 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 SPIN2AQ99865 258 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 SPIN2BQ9BPZ2 258 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 PLEKHF2Q9H8W4 249 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 RNF150Q9ULK6 438 aa11.78□□□□□ -0.52
CACNA1C-231ENST00000616390 SPTBN2O15020 2390 aa11.77□□□□□ -0.52
CACNA1C-231ENST00000616390 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.52
CACNA1C-231ENST00000616390 TUSC2O75896 110 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 OR2H2O95918 312 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 VDAC1P21796 283 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 IGHV1-2P23083 117 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 F2RP25116 425 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 CCL20P78556 96 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 C14orf79Q96F83 325 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 ARV1Q9H2C2 271 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 OBP2BQ9NPH6 170 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 IAPPP10997 89 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 SNRPEP62304 92 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 HLA-DRB3P79483 266 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 IL24Q13007 206 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 ZNF324BQ6AW86 544 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 TMEM178AQ8NBL3 297 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 RTL8AQ9BWD3 113 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 PLK3Q9H4B4 646 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 RNF122Q9H9V4 155 aa11.77□□□□□ -0.53
CACNA1C-231ENST00000616390 SPAARA0A1B0GVQ0 90 aa11.76□□□□□ -0.53
CACNA1C-231ENST00000616390 FAM157AC9JC47 383 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms