RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 CDH20Q9HBT6 801 aa13.46□□□□□ -0.26
SYNRG-223ENST00000616179 HEATR1Q9H583 2144 aaKnown RBP13.45□□□□□ -0.26
SYNRG-223ENST00000616179 PFN1P07737 140 aaKnown RBP13.45□□□□□ -0.26
SYNRG-223ENST00000616179 TGIF2LYQ8IUE0 185 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 LYZL4Q96KX0 146 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 UCN2Q96RP3 112 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 TMEM242Q9NWH2 141 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 RALGAPA1Q6GYQ0 2036 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 ZNF318Q5VUA4 2279 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 TRAV38-1A0A0B4J264 116 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 IGHEP01854 428 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 TM4SF4P48230 202 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 OIT3Q8WWZ8 545 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 IGKV1D-13A0A0B4J2D9 117 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 RAB29O14966 203 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 IGKV1-13P0DP09 117 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 SRP14P37108 136 aaKnown RBP13.45□□□□□ -0.26
SYNRG-223ENST00000616179 CDKN1AP38936 164 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 SERF2P84101 59 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 CLDN23Q96B33 292 aa13.45□□□□□ -0.26
SYNRG-223ENST00000616179 A0A096LPE4 126 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 CTXND1A0A1B0GTU2 59 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 A0A1W2PPZ6 126 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 LRP5LA4QPB2 252 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 ZNF32P17041 273 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 F2RP25116 425 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 FUT6P51993 359 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 WDR61Q9GZS3 305 aaKnown RBP13.44□□□□□ -0.26
SYNRG-223ENST00000616179 SLC35D1Q9NTN3 355 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 PLXNA2O75051 1894 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 AAED1Q7RTV5 226 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 FAM19A2Q8N3H0 131 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 ST6GALNAC6Q969X2 333 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 ZNF488Q96MN9 340 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 OR6C1Q96RD1 312 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 B3GAT1Q9P2W7 334 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 UQCR10Q9UDW1 63 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 HSBP1L1C9JCN9 74 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 RPL36A-HNRNPH2H7BZ11 118 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 PAFAH1B2P68402 229 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 MRGPRX4Q96LA9 322 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 NPIPB7O75200 414 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
SYNRG-223ENST00000616179 ACTL6BO94805 426 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 BCL3P20749 454 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
SYNRG-223ENST00000616179 ZFP30Q9Y2G7 519 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 LAMTOR2Q9Y2Q5 125 aa13.44□□□□□ -0.26
SYNRG-223ENST00000616179 A0A1W2PQD3 144 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 GAB4Q2WGN9 574 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 ZNF296Q8WUU4 475 aaPredicted RBP13.43□□□□□ -0.26
SYNRG-223ENST00000616179 FAM131CQ96AQ9 280 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 WDYHV1Q96HA8 205 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 YPEL4Q96NS1 127 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 WASHC3Q9Y3C0 194 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 SLC22A20A6NK97 555 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 NUPR1O60356 82 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 TNFSF13O75888 250 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 CD38P28907 300 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 OTX1P32242 354 aaPredicted RBP13.43□□□□□ -0.26
SYNRG-223ENST00000616179 RNASE8Q8TDE3 154 aaKnown RBP13.43□□□□□ -0.26
SYNRG-223ENST00000616179 TM2D1Q9BX74 207 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 GDF9O60383 454 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 IL18BPO95998 194 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 OR1F12Q8NHA8 337 aa13.43□□□□□ -0.26
SYNRG-223ENST00000616179 TRAF3IP2O43734 574 aaPredicted RBP13.42□□□□□ -0.26
SYNRG-223ENST00000616179 ZFAND5O76080 213 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 NAPSAO96009 420 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 OR4B1Q8NGF8 309 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 CTXN2P0C2S0 81 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 GABRA2P47869 451 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 ATP5G3P48201 142 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 ZP4Q12836 540 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 TMEM211Q6ICI0 200 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 OR4A47Q6IF82 309 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 RNASEKQ6P5S7 137 aaKnown RBP13.42□□□□□ -0.26
SYNRG-223ENST00000616179 OR8I2Q8N0Y5 310 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 SYNGR4O95473 234 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 UMODP07911 640 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 STUMQ69YW2 141 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 DERL1Q9BUN8 251 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 KCNIP1Q9NZI2 227 aa13.42□□□□□ -0.26
SYNRG-223ENST00000616179 TBL2Q9Y4P3 447 aaKnown RBP13.42□□□□□ -0.26
SYNRG-223ENST00000616179 NOTCH4Q99466 2003 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 TNFSF11O14788 317 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 DEGS1O15121 323 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 ID3Q02535 119 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 EXT1Q16394 746 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 BADQ92934 168 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 ZNF331Q9NQX6 463 aaPredicted RBP13.41□□□□□ -0.26
SYNRG-223ENST00000616179 TMEM210A6NLX4 147 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 LILRA1O75019 489 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 GLB1P16278 677 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 LMO1P25800 156 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 RBM11P57052 281 aaKnown RBP13.41□□□□□ -0.26
SYNRG-223ENST00000616179 H2BFWTQ7Z2G1 175 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 LYPD6Q86Y78 171 aa13.41□□□□□ -0.26
SYNRG-223ENST00000616179 RPP25LQ8N5L8 163 aaKnown RBP13.41□□□□□ -0.26
SYNRG-223ENST00000616179 OR1L3Q8NH93 324 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms