RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ATP5LO75964 103 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
TCF4-248ENST00000616053 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 WSB1Q9Y6I7 421 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 KIAA1644Q3SXP7 199 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 FBXW9Q5XUX1 488 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 SAXO2Q658L1 398 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 KIRREL2Q6UWL6 708 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 OR5AN1Q8NGI8 311 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 SEMA5BQ9P283 1151 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 WIPI2Q9Y4P8 454 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 ANKRD20A5PA0PJZ0 165 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 PPP6CO00743 305 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 PLPPR5Q32ZL2 321 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 BAP18Q8IXM2 172 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 ZC3H13Q5T200 1668 aaKnown RBP11.06□□□□□ -0.64
TCF4-248ENST00000616053 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 EFNB2P52799 333 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 GP2P55259 537 aaKnown RBP11.06□□□□□ -0.64
TCF4-248ENST00000616053 CHCHD5Q9BSY4 110 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 MYLKQ15746 1914 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 GAB4Q2WGN9 574 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 SAPCD1Q5SSQ6 148 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 TNFSF18Q9UNG2 199 aa11.06□□□□□ -0.64
TCF4-248ENST00000616053 KMT2EQ8IZD2 1858 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.05□□□□□ -0.64
TCF4-248ENST00000616053 ARRDC5A6NEK1 342 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 RNASEH2CQ8TDP1 164 aaKnown RBP11.05□□□□□ -0.64
TCF4-248ENST00000616053 PPP1R1CQ8WVI7 109 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 MED12Q93074 2177 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 HMGN4O00479 90 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 ADRB1P08588 477 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 FRRS1LQ9P0K9 344 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 FLVCR2Q9UPI3 526 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 AHRRA9YTQ3 701 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 COX19Q49B96 90 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 KLHDC9Q8NEP7 349 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 IGHV3OR16-13A0A075B7E8 117 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 IGHV3-74A0A0B4J1X5 117 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 CLDN34H7C241 214 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 MRPL20Q9BYC9 149 aaKnown RBP11.05□□□□□ -0.64
TCF4-248ENST00000616053 CLEC2DQ9UHP7 191 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 ADGRB1O14514 1584 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 SPTBN1Q01082 2364 aaKnown RBP11.05□□□□□ -0.64
TCF4-248ENST00000616053 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 CXorf1O96002 111 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 VAX1Q5SQQ9 334 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 SLC35E3Q7Z769 313 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 ZIC5Q96T25 663 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 SPEF2Q9C093 1822 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 SDK2Q58EX2 2172 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 OR5AC2Q9NZP5 309 aa11.05□□□□□ -0.64
TCF4-248ENST00000616053 CXorf65A6NEN9 183 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 CCR2P41597 374 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
TCF4-248ENST00000616053 NKG7Q16617 165 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 DNM1P46Q6ZS02 220 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 ATOH8Q96SQ7 321 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 HDHD3Q9BSH5 251 aaPredicted RBP11.04□□□□□ -0.64
TCF4-248ENST00000616053 TLNRD1Q9H1K6 362 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 HEATR5BQ9P2D3 2071 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 BSXQ3C1V8 233 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 TMEM255AQ5JRV8 349 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 MMD2Q8IY49 270 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 SMIM19Q96E16 107 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 SFXN3Q9BWM7 321 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 LNP1A1A4G5 178 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 PSORS1C1Q9UIG5 152 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 FANCMQ8IYD8 2048 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 CEACAM5P06731 702 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 SSTR5P35346 364 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 ANAPC10Q9UM13 185 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 PAGE4O60829 102 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 DYNLT3P51808 116 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 FABP2P12104 132 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 ARRDC1Q8N5I2 433 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 RNF122Q9H9V4 155 aa11.04□□□□□ -0.64
TCF4-248ENST00000616053 TRAV20A0A0B4J274 112 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 C7orf71A4D174 169 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 DCTDP32321 178 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 TRAV12-3A0A0B4J271 114 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 IGKV6-21A0A0C4DH24 114 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 IGHV1-69-2A0A0G2JMI3 117 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 EDIL3O43854 480 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
TCF4-248ENST00000616053 HBZP02008 142 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 ISL1P61371 349 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 P2RY6Q15077 328 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 IFITM5A6NNB3 132 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 DGCR2P98153 550 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 ZMAT4Q9H898 229 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 KLKB1P03952 638 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 ZNF25P17030 456 aaPredicted RBP11.03□□□□□ -0.64
TCF4-248ENST00000616053 PNKDQ8N490 385 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 CDC42EP3Q9UKI2 254 aa11.03□□□□□ -0.64
TCF4-248ENST00000616053 PREX1Q8TCU6 1659 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms