RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 LSAMPQ13449 338 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 P2RY14Q15391 338 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 RAB11BQ15907 218 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 OR51D1Q8NGF3 324 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 GON7Q9BXV9 100 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 LPAR5Q9H1C0 372 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 RIMS4Q9H426 269 aaPredicted RBP19.9■□□□□ 0.78
VEGFA-227ENST00000615393 PLSCR3Q9NRY6 295 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 ZFP57Q9NU63 452 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 NECAP2Q9NVZ3 263 aa19.9■□□□□ 0.78
VEGFA-227ENST00000615393 PRB2P02812 416 aaPredicted RBP19.89■□□□□ 0.77
VEGFA-227ENST00000615393 IGLL1P15814 213 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 CALRP27797 417 aaKnown RBP19.89■□□□□ 0.77
VEGFA-227ENST00000615393 RPL23AP62750 156 aaKnown RBP19.89■□□□□ 0.77
VEGFA-227ENST00000615393 TBCEQ15813 527 aaPredicted RBP19.89■□□□□ 0.77
VEGFA-227ENST00000615393 MOB1BQ7L9L4 216 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 C5orf24Q7Z6I8 188 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 SVOPQ8N4V2 548 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 OR2AK2Q8NG84 335 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 GFI1Q99684 422 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 ACOT13Q9NPJ3 140 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 STEAP1Q9UHE8 339 aa19.89■□□□□ 0.77
VEGFA-227ENST00000615393 A0A0A6YYD4 124 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 NAPSAO96009 420 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 SLC6A1P30531 599 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 FABP5Q01469 135 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 ZNF880Q6PDB4 577 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 ZNF367Q7RTV3 350 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 SETD6Q8TBK2 473 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 IL1F10Q8WWZ1 152 aa19.88■□□□□ 0.77
VEGFA-227ENST00000615393 RCC1LQ96I51 464 aaKnown RBP19.88■□□□□ 0.77
VEGFA-227ENST00000615393 LINC01548A6NM66 108 aa19.87■□□□□ 0.77
VEGFA-227ENST00000615393 RRP9O43818 475 aaKnown RBP19.87■□□□□ 0.77
VEGFA-227ENST00000615393 PSMD7P51665 324 aa19.87■□□□□ 0.77
VEGFA-227ENST00000615393 TEX38Q6PEX7 206 aa19.87■□□□□ 0.77
VEGFA-227ENST00000615393 ODF3L1Q8IXM7 274 aa19.87■□□□□ 0.77
VEGFA-227ENST00000615393 FAM89BQ8N5H3 189 aa19.87■□□□□ 0.77
VEGFA-227ENST00000615393 FAM71E2Q8N5Q1 922 aa19.87■□□□□ 0.77
VEGFA-227ENST00000615393 RAB26Q9ULW5 256 aa19.87■□□□□ 0.77
VEGFA-227ENST00000615393 NUDT19A8MXV4 375 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 SOCS1O15524 211 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 DUS4LO95620 317 aaKnown RBP19.86■□□□□ 0.77
VEGFA-227ENST00000615393 SOX6P35712 828 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 F2RL1P55085 397 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 MRPL20Q9BYC9 149 aaKnown RBP19.86■□□□□ 0.77
VEGFA-227ENST00000615393 AK3Q9UIJ7 227 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 HSF4Q9ULV5 492 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 MGAT4AQ9UM21 535 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 V9GY05 133 aa19.86■□□□□ 0.77
VEGFA-227ENST00000615393 TRBV6-6A0A0A6YYG2 114 aa19.85■□□□□ 0.77
VEGFA-227ENST00000615393 MMDQ15546 238 aa19.85■□□□□ 0.77
VEGFA-227ENST00000615393 PNLIPRP3Q17RR3 467 aa19.85■□□□□ 0.77
VEGFA-227ENST00000615393 FOXB2Q5VYV0 432 aa19.85■□□□□ 0.77
VEGFA-227ENST00000615393 ZNF833PQ6ZTB9 187 aa19.85■□□□□ 0.77
VEGFA-227ENST00000615393 NABP2Q9BQ15 211 aa19.85■□□□□ 0.77
VEGFA-227ENST00000615393 PIPOXQ9P0Z9 390 aa19.85■□□□□ 0.77
VEGFA-227ENST00000615393 SAA2-SAA4A0A096LPE2 208 aa19.84■□□□□ 0.77
VEGFA-227ENST00000615393 SAA2P0DJI9 122 aaPredicted RBP19.84■□□□□ 0.77
VEGFA-227ENST00000615393 FAM71F2Q6NXP2 309 aa19.84■□□□□ 0.77
VEGFA-227ENST00000615393 LINC00482Q8N8I6 264 aa19.84■□□□□ 0.77
VEGFA-227ENST00000615393 KLHL30-AS1Q8NEE0 82 aa19.84■□□□□ 0.77
VEGFA-227ENST00000615393 FAM3DQ96BQ1 224 aa19.84■□□□□ 0.77
VEGFA-227ENST00000615393 VDAC1P21796 283 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 OR3A3P47888 321 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 VEGFCP49767 419 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 CLDN12P56749 244 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 ETV3LQ6ZN32 361 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 Q6ZPA2 131 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 C8orf86Q6ZUL3 223 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 MRAPQ8TCY5 172 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 HSPB9Q9BQS6 159 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 ZNF251Q9BRH9 671 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 IFI27L2Q9H2X8 130 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 C12orf4Q9NQ89 552 aa19.83■□□□□ 0.77
VEGFA-227ENST00000615393 AURKAIP1Q9NWT8 199 aaPredicted RBP19.83■□□□□ 0.77
VEGFA-227ENST00000615393 FOXI3A8MTJ6 420 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-227ENST00000615393 PDCD5O14737 125 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 RAB29O14966 203 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 ST8SIA5O15466 376 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 THBS3P49746 956 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 ACTBP60709 375 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 HLA-DRB3P79483 266 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 SSX1Q16384 188 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 C2orf76Q3KRA6 126 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 CXorf66Q5JRM2 361 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-227ENST00000615393 ZNF695Q8IW36 515 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 MRPL41Q8IXM3 137 aaKnown RBP19.82■□□□□ 0.76
VEGFA-227ENST00000615393 OR56B1Q8NGI3 324 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 RBMXL1Q96E39 390 aaKnown RBP19.82■□□□□ 0.76
VEGFA-227ENST00000615393 ARHGAP5-AS1Q96IT6 56 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 HDHD3Q9BSH5 251 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-227ENST00000615393 GPR61Q9BZJ8 451 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 SLC23A1Q9UHI7 598 aa19.82■□□□□ 0.76
VEGFA-227ENST00000615393 ZNF107Q9UII5 783 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-227ENST00000615393 DENRO43583 198 aaKnown RBP19.81■□□□□ 0.76
VEGFA-227ENST00000615393 MYCNOSP40205 109 aa19.81■□□□□ 0.76
VEGFA-227ENST00000615393 TMEM50BP56557 158 aa19.81■□□□□ 0.76
VEGFA-227ENST00000615393 FOXE3Q13461 319 aa19.81■□□□□ 0.76
VEGFA-227ENST00000615393 C18orf65Q6ZTR6 163 aa19.81■□□□□ 0.76
VEGFA-227ENST00000615393 PECRQ9BY49 303 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms