RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 DEFB108AA8MXU0 73 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 SPSB2Q99619 263 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 SEBOXQ9HB31 216 aaPredicted RBP12.74□□□□□ -0.37
SNPH-203ENST00000614659 NUP214P35658 2090 aaPredicted RBP12.74□□□□□ -0.37
SNPH-203ENST00000614659 ZNF25P17030 456 aaPredicted RBP12.74□□□□□ -0.37
SNPH-203ENST00000614659 KCNMB1Q16558 191 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 HIKESHIQ53FT3 197 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 RASL11BQ9BPW5 248 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 RLFQ13129 1914 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 DOCK3Q8IZD9 2030 aa12.74□□□□□ -0.37
SNPH-203ENST00000614659 ERVH48-1M5A8F1 160 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 DAOP14920 347 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 CRISP2P16562 243 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 PDLIM4P50479 330 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 TMEM204Q9BSN7 226 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 PRSS50Q9UI38 385 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 CDIPTO14735 213 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 TMPRSS2O15393 492 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 SCGB1C2P0DMR2 95 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 FGF8P55075 233 aaPredicted RBP12.73□□□□□ -0.37
SNPH-203ENST00000614659 DHRS7BQ6IAN0 325 aaPredicted RBP12.73□□□□□ -0.37
SNPH-203ENST00000614659 OR4F17Q8NGA8 305 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 RFESDQ8TAC1 157 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 OR10C1Q96KK4 312 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 SNX22Q96L94 193 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 Q96M66 194 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 PIPOXQ9P0Z9 390 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 FAM90A26D6RGX4 464 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 GOSR1O95249 250 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 TBX6O95947 436 aaPredicted RBP12.73□□□□□ -0.37
SNPH-203ENST00000614659 OPRK1P41145 380 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 ERVFRD-1P60508 538 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 OR2T6Q8NHC8 308 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 MEGF10Q96KG7 1140 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
SNPH-203ENST00000614659 AAMDCQ9H7C9 122 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 SPAG17Q6Q759 2223 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 ATP6V0CP27449 155 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 GNG10P50151 68 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 VWA1Q6PCB0 445 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 VWCEQ96DN2 955 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 TXNDC17Q9BRA2 123 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 PITPNC1Q9UKF7 332 aa12.73□□□□□ -0.37
SNPH-203ENST00000614659 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 ELOBQ15370 118 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 BCL2L2Q92843 193 aaPredicted RBP12.72□□□□□ -0.37
SNPH-203ENST00000614659 BMPR1BO00238 502 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 LGALS7P47929 136 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 P2RY4P51582 365 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 SLC35E3Q7Z769 313 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 LRP11Q86VZ4 500 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 CISD1Q9NZ45 108 aaKnown RBP12.72□□□□□ -0.37
SNPH-203ENST00000614659 SPINK4O60575 86 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 LYRM7Q5U5X0 104 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 UBALD1Q8TB05 177 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 DYRK2Q92630 601 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 IL36GQ9NZH8 169 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 IGHV3-43A0A0B4J1X8 118 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 ACAA1P09110 424 aaPredicted RBP12.72□□□□□ -0.37
SNPH-203ENST00000614659 OR5AL1P0C617 328 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 IGHV3-43DP0DP04 118 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
SNPH-203ENST00000614659 MELTFP08582 738 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 HKR1P10072 659 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 PSG2P11465 335 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 HDHD3Q9BSH5 251 aaPredicted RBP12.71□□□□□ -0.37
SNPH-203ENST00000614659 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 H3BQ15 152 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 MRGPRFQ96AM1 343 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 SPOCK3Q9BQ16 436 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 CXorf1O96002 111 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 LINC00470Q9BZP3 86 aa12.71□□□□□ -0.37
SNPH-203ENST00000614659 M0R2Z0 102 aa12.71□□□□□ -0.38
SNPH-203ENST00000614659 MPDU1O75352 247 aa12.71□□□□□ -0.38
SNPH-203ENST00000614659 HLA-DRB5Q30154 266 aa12.71□□□□□ -0.38
SNPH-203ENST00000614659 Q56UQ5 140 aa12.71□□□□□ -0.38
SNPH-203ENST00000614659 FDCSPQ8NFU4 85 aa12.71□□□□□ -0.38
SNPH-203ENST00000614659 TMEM191AQ9H0A3 160 aa12.71□□□□□ -0.38
SNPH-203ENST00000614659 OR2J3O76001 311 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 HPRT1P00492 218 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 CFHR1Q03591 330 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 TUSC1Q2TAM9 212 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 SHISA3A0PJX4 238 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 J3QRE1 110 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
SNPH-203ENST00000614659 SLC25A5P05141 298 aaKnown RBP12.7□□□□□ -0.38
SNPH-203ENST00000614659 NRN1LQ496H8 165 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 GCSAMQ8N6F7 178 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 CCL19Q99731 98 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 ZNF273Q14593 569 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 PRSS3P2Q8NHM4 247 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 FAM57AQ8TBR7 257 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
SNPH-203ENST00000614659 DHRS11Q6UWP2 260 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms