RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZNF611Q8N823 705 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IL1F10Q8WWZ1 152 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR5P3Q8WZ94 311 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MSI2Q96DH6 328 aaKnown RBP9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SYT3Q9BQG1 590 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR51B6Q9H340 312 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TUBG2Q9NRH3 451 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FUT9Q9Y231 359 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PPIAL4AQ9Y536 164 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 DNAJC13O75165 2243 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IGSF23A1L1A6 192 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 HSPA12AO43301 675 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ADAM20O43506 726 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CD46P15529 392 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TFPI2P48307 235 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SLC10A1Q14973 349 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 LIAT1Q6ZQX7 453 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 GAPTQ8N292 157 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR2C3Q8N628 320 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMEM56Q96MV1 263 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 C11orf1Q9H5F2 150 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 Q9N2K0 584 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMEM9BQ9NQ34 198 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SLC2A9Q9NRM0 540 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 POMT1Q9Y6A1 747 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMEM56-RWDD3S4R434 201 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FREM2Q5SZK8 3169 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 GTF3C1Q12789 2109 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PMP22Q01453 160 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PRDX4Q13162 271 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 BTNL3Q6UXE8 466 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CCDC71LQ8N9Z2 235 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PRRG4Q9BZD6 226 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMED3Q9Y3Q3 217 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TRAV34A0A0B4J273 112 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CHRNA7P36544 502 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FAM3BP58499 235 aaPredicted RBP9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 HLA-DRB3P79483 266 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TP53RKQ96S44 253 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 VSIRQ9H7M9 311 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PTBP3O95758 552 aaKnown RBP9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 UCP2P55851 309 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 RAB1AP62820 205 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TGFBR3Q03167 851 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FBXW9Q5XUX1 488 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR8G2PQ6IF36 304 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMEM171Q8WVE6 324 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 NANOS1Q8WY41 292 aaKnown RBP9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PIGCQ92535 297 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SLC25A31Q9H0C2 315 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ROS1P08922 2347 aa9.24□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ZNF503-AS2A6NEH8 195 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SRP19P09132 144 aaKnown RBP9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 COL10A1Q03692 680 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 HES3Q5TGS1 186 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 GMPPAQ96IJ6 420 aaPredicted RBP9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PCGF1Q9BSM1 259 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMEM204Q9BSN7 226 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ERASQ7Z444 233 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR56B2PQ8NGI1 322 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SLC39A7Q92504 469 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 HIST1H2AAQ96QV6 131 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ABCA1O95477 2261 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CHST1O43916 411 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TNFSF15O95150 251 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CDS2O95674 445 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IL18BPO95998 194 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 METTL15P1P0C7V9 234 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 NUFIP2Q7Z417 695 aaKnown RBP9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMEM178AQ8NBL3 297 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 HES7Q9BYE0 225 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 HIPK2Q9H2X6 1198 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 GVINP1Q7Z2Y8 2422 aa9.23□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 KIR2DS1A0A191URI9 304 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 C1QTNF9BB2RNN3 333 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SPINK4O60575 86 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SLC25A6P12236 298 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FGF7P21781 194 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 AADACP22760 399 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 LMO1P25800 156 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 KIR2DS4P43632 304 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 KIR2DS1Q14954 304 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 LPAL2Q16609 132 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ZNF573Q86YE8 665 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR4D5Q8NGN0 318 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SDSLQ96GA7 329 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 RBM14Q96PK6 669 aaKnown RBP9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SMIM7Q9BQ49 75 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PATZ1Q9HBE1 687 aaKnown RBP9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ATP23Q9Y6H3 246 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 A0A1B0GWJ7 208 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 AMBPP02760 352 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PAX6P26367 422 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PLP2Q04941 152 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SPINK9Q5DT21 86 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MRPL21Q7Z2W9 205 aaKnown RBP9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IL22RA1Q8N6P7 574 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms