RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 SH2D1BO14796 132 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 CD74P04233 296 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 DTYMKP23919 212 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 DLX6P56179 175 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 RBM39Q14498 530 aaKnown RBP17.58■□□□□ 0.4
CBWD1-223ENST00000613988 ATAD3CQ5T2N8 411 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 STEAP1BQ6NZ63 245 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 LIAT1Q6ZQX7 453 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 LHFPL4Q7Z7J7 247 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 RTN4RL2Q86UN3 420 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 OR13D1Q8NGV5 346 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 PIFOQ8TCI5 191 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 SULT4A1Q9BR01 284 aa17.58■□□□□ 0.4
CBWD1-223ENST00000613988 RANBP3Q9H6Z4 567 aaPredicted RBP17.58■□□□□ 0.4
CBWD1-223ENST00000613988 PRKDCP78527 4128 aaKnown RBP17.57■□□□□ 0.4
CBWD1-223ENST00000613988 MCRIP1C9JLW8 97 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 DEGS1O15121 323 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 ZNF737O75373 536 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 ARG1P05089 322 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 ZNF728P0DKX0 622 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 SNU13P55769 128 aaKnown RBP17.57■□□□□ 0.4
CBWD1-223ENST00000613988 MEF2DQ14814 521 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 ACTBL2Q562R1 376 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 Q6P435 159 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 HOGA1Q86XE5 327 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 CMSS1Q9BQ75 279 aaKnown RBP17.57■□□□□ 0.4
CBWD1-223ENST00000613988 NPFFR1Q9GZQ6 430 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 IL36RNQ9UBH0 155 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 AK3Q9UIJ7 227 aa17.57■□□□□ 0.4
CBWD1-223ENST00000613988 SPNP16150 400 aa17.56■□□□□ 0.4
CBWD1-223ENST00000613988 BTCP35070 178 aa17.56■□□□□ 0.4
CBWD1-223ENST00000613988 PLA1AQ53H76 456 aa17.56■□□□□ 0.4
CBWD1-223ENST00000613988 PLET1Q6UQ28 207 aa17.56■□□□□ 0.4
CBWD1-223ENST00000613988 SNX22Q96L94 193 aa17.56■□□□□ 0.4
CBWD1-223ENST00000613988 RIMS4Q9H426 269 aaPredicted RBP17.56■□□□□ 0.4
CBWD1-223ENST00000613988 ZNF581Q9P0T4 197 aa17.56■□□□□ 0.4
CBWD1-223ENST00000613988 TBL2Q9Y4P3 447 aaKnown RBP17.56■□□□□ 0.4
CBWD1-223ENST00000613988 CHST1O43916 411 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 RAB3DO95716 219 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 RBP4P02753 201 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 MT-ND4P03905 459 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 CD3DP04234 171 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 RAB13P51153 203 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 EDDM3AQ14507 147 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 DYNAPQ8N1N2 210 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 KLHDC1Q8N7A1 406 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 C11orf44Q8N8P7 122 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 OR4C16Q8NGL9 310 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 MALSU1Q96EH3 234 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 C12orf4Q9NQ89 552 aa17.55■□□□□ 0.4
CBWD1-223ENST00000613988 A0A1B0GVG6 124 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 TMEM82A0PJX8 343 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 IGHV1-8P0DP01 117 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 ZNF44P15621 663 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 LMO1P25800 156 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 DUSP1P28562 367 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 MEF2CQ06413 473 aaPredicted RBP17.54■□□□□ 0.4
CBWD1-223ENST00000613988 SSX2Q16385 188 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 SRSF7Q16629 238 aaKnown RBP eCLIP17.54■□□□□ 0.4
CBWD1-223ENST00000613988 C1QL4Q86Z23 238 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 GVQW1Q8N7I0 195 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 SUMF2Q8NBJ7 301 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 CREB3L1Q96BA8 519 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 ZNF714Q96N38 554 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 DPCDQ9BVM2 203 aaPredicted RBP17.54■□□□□ 0.4
CBWD1-223ENST00000613988 DSCAML1Q8TD84 2053 aa17.54■□□□□ 0.4
CBWD1-223ENST00000613988 TRAV24A0A0B4J272 114 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 hADV38S2A0JD32 116 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 UBE2QL1A1L167 161 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 ODF3BA8MYP8 253 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 OR2H2O95918 312 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 HAND1O96004 215 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 VSIG10L2P0DP72 767 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 HLA-DMAP28067 261 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 TAS2R46P59540 309 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 RNASE10Q5GAN6 216 aaKnown RBP17.53■□□□□ 0.4
CBWD1-223ENST00000613988 ZNF626Q68DY1 528 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 HIST2H2BDQ6DRA6 164 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 BEST4Q8NFU0 473 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 OR11H6Q8NGC7 330 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 MCUBQ9NWR8 336 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 TCF19Q9Y242 345 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 NUBP2Q9Y5Y2 271 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 DISC1C4P0D8 188 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 FCGR3AP08637 254 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 GRK1Q15835 563 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 OR4K15Q8NH41 348 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 CFHR4Q92496 578 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 SNAPC3Q92966 411 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 MARVELD1Q9BSK0 173 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 ST6GALNAC5Q9BVH7 336 aa17.53■□□□□ 0.4
CBWD1-223ENST00000613988 TRBV6-6A0A0A6YYG2 114 aa17.52■□□□□ 0.39
CBWD1-223ENST00000613988 SLC33A1O00400 549 aaPredicted RBP17.52■□□□□ 0.39
CBWD1-223ENST00000613988 NAPSAO96009 420 aa17.52■□□□□ 0.39
CBWD1-223ENST00000613988 TCRBP04435 133 aa17.52■□□□□ 0.39
CBWD1-223ENST00000613988 KCNJ3P48549 501 aa17.52■□□□□ 0.39
CBWD1-223ENST00000613988 PAN3Q58A45 887 aaKnown RBP17.52■□□□□ 0.39
CBWD1-223ENST00000613988 VAX1Q5SQQ9 334 aa17.52■□□□□ 0.39
CBWD1-223ENST00000613988 Q6ZS49 121 aa17.52■□□□□ 0.39
CBWD1-223ENST00000613988 TCF23Q7RTU1 214 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms