RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 RITA1Q96K30 269 aa10.07□□□□□ -0.8
CSTF1-208ENST00000613138 ZNF230Q9UIE0 474 aaPredicted RBP10.07□□□□□ -0.8
CSTF1-208ENST00000613138 DAPK2Q9UIK4 370 aa10.07□□□□□ -0.8
CSTF1-208ENST00000613138 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
CSTF1-208ENST00000613138 RAB22AQ9UL26 194 aa10.07□□□□□ -0.8
CSTF1-208ENST00000613138 SSR3Q9UNL2 185 aa10.07□□□□□ -0.8
CSTF1-208ENST00000613138 RAB27BO00194 218 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 GAPDHP04406 335 aaKnown RBP10.06□□□□□ -0.8
CSTF1-208ENST00000613138 RAB7AP51149 207 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 LSM3P62310 102 aaKnown RBP10.06□□□□□ -0.8
CSTF1-208ENST00000613138 HLA-DRB3P79483 266 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 NSUN5P1Q3KNT7 163 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 RPL39P5Q59GN2 51 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 OR5H6Q8NGV6 325 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 LGALS14Q8TCE9 139 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 EAF1Q96JC9 268 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-208ENST00000613138 NOL4LQ96MY1 436 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-208ENST00000613138 CMSS1Q9BQ75 279 aaKnown RBP10.06□□□□□ -0.8
CSTF1-208ENST00000613138 ABHD14AQ9BUJ0 271 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 MRPL20Q9BYC9 149 aaKnown RBP10.06□□□□□ -0.8
CSTF1-208ENST00000613138 WNT10AQ9GZT5 417 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 Q9N2K0 584 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 HSF4Q9ULV5 492 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
CSTF1-208ENST00000613138 IGKV1D-8A0A087WSZ0 117 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 NOTOA8MTQ0 251 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 ADARB2-AS1A8MUL3 147 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 MFNGO00587 321 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 GALP22466 123 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 CNTFRP26992 372 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 F2RL1P55085 397 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 LINC00205P59089 165 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 TCTEX1D4Q5JR98 221 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 TRAT1Q6PIZ9 186 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 C16orf82Q7Z2V1 217 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 IZUMO1Q8IYV9 350 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 OR8H3Q8N146 312 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 Q8N6K4 173 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 C5orf56Q8N8D9 126 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 C8orf31Q8N9H6 132 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 OR56B1Q8NGI3 324 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 OR10R2Q8NGX6 335 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 GALMQ96C23 342 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 RAB3CQ96E17 227 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 ABHD14BQ96IU4 210 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 CITED2Q99967 270 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-208ENST00000613138 ATG5Q9H1Y0 275 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 IFI27L2Q9H2X8 130 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 SLC23A1Q9UHI7 598 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 RNF150Q9ULK6 438 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 MOB4Q9Y3A3 225 aa10.05□□□□□ -0.8
CSTF1-208ENST00000613138 MEGF8Q7Z7M0 2845 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 SAA2-SAA4A0A096LPE2 208 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 TRBV6-6A0A0A6YYG2 114 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 A0A1W2PRX2 142 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 YPEL1O60688 119 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 FBXO24O75426 580 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 FAM106CPP0CH98 169 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 SAA2P0DJI9 122 aaPredicted RBP10.04□□□□□ -0.8
CSTF1-208ENST00000613138 PSMD7P51665 324 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 ZNF137PP52743 207 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 HTD2P86397 168 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 TMEM30BQ3MIR4 351 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 IGSF11Q5DX21 431 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 SFXN4Q6P4A7 337 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 GLDNQ6ZMI3 551 aaPredicted RBP10.04□□□□□ -0.8
CSTF1-208ENST00000613138 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 TGIF2LXQ8IUE1 241 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 YIPF6Q96EC8 236 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 KCTD7Q96MP8 289 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 C12orf4Q9NQ89 552 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 PLSCR3Q9NRY6 295 aa10.04□□□□□ -0.8
CSTF1-208ENST00000613138 NCBP2LA6PVI3 153 aaKnown RBP10.03□□□□□ -0.8
CSTF1-208ENST00000613138 FCGR3AP08637 254 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 GSTT2P0CG29 244 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 GSTT2BP0CG30 244 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 SMIM18P0DKX4 95 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 HIST1H1DP16402 221 aaKnown RBP10.03□□□□□ -0.8
CSTF1-208ENST00000613138 RAB6AP20340 208 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 IL3RAP26951 378 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 LSAMPQ13449 338 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 EBI3Q14213 229 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 Q3ZCU0 254 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 IDNKQ5T6J7 187 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 ZNF329Q86UD4 541 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 Q8N9W7 124 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 OR5AU1Q8NGC0 362 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 SLC25A38Q96DW6 304 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 NABP2Q9BQ15 211 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 HSPB9Q9BQS6 159 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 ZNF251Q9BRH9 671 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 C11orf54Q9H0W9 315 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-208ENST00000613138 ABRACLQ9P1F3 81 aa10.03□□□□□ -0.8
CSTF1-208ENST00000613138 A0A087WXM4 84 aa10.02□□□□□ -0.81
CSTF1-208ENST00000613138 M0QZK8 103 aa10.02□□□□□ -0.81
CSTF1-208ENST00000613138 LANCL1O43813 399 aa10.02□□□□□ -0.81
CSTF1-208ENST00000613138 PROP1O75360 226 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms