RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 WNT9BO14905 357 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 C1orf185Q5T7R7 199 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 MOB3BQ86TA1 216 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 PARP11Q9NR21 331 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 CLN8Q9UBY8 286 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 H0Y980 276 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 OR10G4Q8NGN3 311 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 OR10G9Q8NGN4 311 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 OR10G7Q8NGN6 311 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 RND1Q92730 232 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 MRPS18CQ9Y3D5 142 aaKnown RBP11.24□□□□□ -0.61
TCF3-220ENST00000611869 SULT1A2P50226 295 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 HFEQ30201 348 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 OR13D1Q8NGV5 346 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 OR4S2Q8NH73 311 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 DAZAP1Q96EP5 407 aaKnown RBP11.24□□□□□ -0.61
TCF3-220ENST00000611869 TMEM147Q9BVK8 224 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 PNRC2Q9NPJ4 139 aaKnown RBP11.24□□□□□ -0.61
TCF3-220ENST00000611869 LDLRAD4O15165 306 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 CLDN14O95500 239 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 GAPDHP04406 335 aaKnown RBP11.24□□□□□ -0.61
TCF3-220ENST00000611869 CRYGSP22914 178 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 WBP1Q96G27 269 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 SAMD10Q9BYL1 202 aa11.24□□□□□ -0.61
TCF3-220ENST00000611869 RNF222A6NCQ9 220 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 ZNF561Q8N587 486 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 CA5BP1Q8WTZ4 195 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 WDYHV1Q96HA8 205 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 NRIP2Q9BQI9 281 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 PATZ1Q9HBE1 687 aaKnown RBP11.23□□□□□ -0.61
TCF3-220ENST00000611869 SLC35D1Q9NTN3 355 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 IL36GQ9NZH8 169 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 INTS1Q8N201 2190 aaKnown RBP11.23□□□□□ -0.61
TCF3-220ENST00000611869 BCL2L2Q92843 193 aaPredicted RBP11.23□□□□□ -0.61
TCF3-220ENST00000611869 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 GAL3ST2Q9H3Q3 398 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 DUXBA0A1W2PPF3 345 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 ZNF737O75373 536 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 ADH4P08319 380 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 COX7A1P24310 79 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 SELENOHQ8IZQ5 122 aaKnown RBP11.23□□□□□ -0.61
TCF3-220ENST00000611869 FAM89BQ8N5H3 189 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 C15orf54Q8N8G6 183 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 CCL13Q99616 98 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 NIT2Q9NQR4 276 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 KIAA1671Q9BY89 1806 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 F6UZH7 168 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
TCF3-220ENST00000611869 HSD17B10Q99714 261 aaKnown RBP11.23□□□□□ -0.61
TCF3-220ENST00000611869 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 C7orf77A4D0Y5 90 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CD200P41217 278 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 GLIPR1P48060 266 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 NQO2P16083 231 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CDC34P49427 236 aaPredicted RBP11.22□□□□□ -0.61
TCF3-220ENST00000611869 FHITP49789 147 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 PUSL1Q8N0Z8 303 aaKnown RBP11.22□□□□□ -0.61
TCF3-220ENST00000611869 ZBTB34Q8NCN2 500 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 TMEM230Q96A57 120 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 OR51I2Q9H344 312 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 MGST3O14880 152 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CD3EP07766 207 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CECR9P0C854 216 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CT45A6P0DMU7 189 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CT45A5P0DMU8 189 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CT45A7P0DMV0 189 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 IGHV1-2P23083 117 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 TAS2R45P59539 299 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CT45A1Q5HYN5 189 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 BTNL8Q6UX41 500 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 CT45A3Q8NHU0 189 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 ZNF665Q9H7R5 613 aa11.22□□□□□ -0.61
TCF3-220ENST00000611869 SMPD2O60906 423 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 EIF3GO75821 320 aaKnown RBP eCLIP11.21□□□□□ -0.61
TCF3-220ENST00000611869 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
TCF3-220ENST00000611869 PSG7Q13046 419 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 NSUN5P2Q63ZY6 315 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 FGFRL1Q8N441 504 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 CACFD1Q9UGQ2 172 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 DOCK10Q96BY6 2186 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 MPV17P39210 176 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 UCP3P55916 312 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 GFRA1P56159 465 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 TLNRD1Q9H1K6 362 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 MED13LQ71F56 2210 aa11.21□□□□□ -0.61
TCF3-220ENST00000611869 SH3BGRL3Q9H299 93 aa11.21□□□□□ -0.62
TCF3-220ENST00000611869 FAM74A7A6NL05 159 aa11.21□□□□□ -0.62
TCF3-220ENST00000611869 PITX3O75364 302 aa11.21□□□□□ -0.62
TCF3-220ENST00000611869 GYPAP02724 150 aa11.21□□□□□ -0.62
TCF3-220ENST00000611869 ATP6V1FQ16864 119 aa11.21□□□□□ -0.62
TCF3-220ENST00000611869 VMA21Q3ZAQ7 101 aa11.21□□□□□ -0.62
TCF3-220ENST00000611869 FAM74A3Q4VXF1 159 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms