RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ASCL1P50553 236 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 HBG1P69891 147 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 HBG2P69892 147 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 CATR1Q13166 79 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 SRSF6Q13247 344 aaKnown RBP8.78□□□□□ -1
PABPC1-224ENST00000610907 AKR1C8PQ5T2L2 129 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 WDR82Q6UXN9 313 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 Q6ZRM9 215 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 BHLHA15Q7RTS1 189 aaPredicted RBP8.78□□□□□ -1
PABPC1-224ENST00000610907 CXorf67Q86X51 503 aaPredicted RBP8.78□□□□□ -1
PABPC1-224ENST00000610907 PRR18Q8N4B5 295 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 ZNF610Q8N9Z0 462 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 NINJ1Q92982 152 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 RBMXL1Q96E39 390 aaKnown RBP8.78□□□□□ -1
PABPC1-224ENST00000610907 EGLN1Q9GZT9 426 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 CACNG5Q9UF02 275 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 OR14J1Q9UGF5 321 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 LAMP3Q9UQV4 416 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 TRAV39A0A0B4J263 110 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 IGHV1-18A0A0C4DH31 117 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 RBFOX3A6NFN3 312 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 C12orf77C9JDV5 145 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 C3orf80F5H4A9 247 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 PTBP3O95758 552 aaKnown RBP8.78□□□□□ -1
PABPC1-224ENST00000610907 CFHR2P36980 270 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 OR3A1P47881 315 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 FOXF2Q12947 444 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 RHEBQ15382 184 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 AVPI1Q5T686 147 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 SPSB3Q6PJ21 355 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 Q6ZR03 302 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 FGFRL1Q8N441 504 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 TMEM217Q8N7C4 229 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 SCGB1C1Q8TD33 95 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 TAAR6Q96RI8 345 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 PSMG3Q9BT73 122 aaPredicted RBP8.78□□□□□ -1
PABPC1-224ENST00000610907 PSENENQ9NZ42 101 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 SLC25A15Q9Y619 301 aa8.78□□□□□ -1
PABPC1-224ENST00000610907 A6NLC8 198 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 COLCA2A8K830 154 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 WISP2O76076 250 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 HBZP02008 142 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 ADH4P08319 380 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 NFYBP25208 207 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 PPP1CCP36873 323 aaKnown RBP8.77□□□□□ -1.01
PABPC1-224ENST00000610907 FABP6P51161 128 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 SERF2P84101 59 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 HTD2P86397 168 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 EIF4EBP1Q13541 118 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-224ENST00000610907 RTP5Q14D33 572 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 RNF212Q495C1 297 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 ZNF66Q6ZN08 573 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 ZNF295-AS1Q8N0V1 137 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 OR1L1Q8NH94 360 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 PPP1R35Q8TAP8 253 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 COQ2Q96H96 371 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 PRELID1Q9Y255 219 aa8.77□□□□□ -1.01
PABPC1-224ENST00000610907 CACNA1HO95180 2353 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 C7orf77A4D0Y5 90 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 WNT9BO14905 357 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 NDUFA2O43678 99 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 SCAF4O95104 1147 aaKnown RBP8.76□□□□□ -1.01
PABPC1-224ENST00000610907 LY86O95711 162 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 HSPB1P04792 205 aaKnown RBP8.76□□□□□ -1.01
PABPC1-224ENST00000610907 ZNF16P17020 682 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-224ENST00000610907 GZMHP20718 246 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 AESQ08117 197 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 SOHLH1Q5JUK2 328 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 KRBOX4Q5JUW0 171 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 TIMM23BQ5SRD1 257 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 SLC25A24Q6NUK1 477 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 ZNF826PQ6ZT77 177 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 OPN3Q9H1Y3 402 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-224ENST00000610907 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-224ENST00000610907 HSPB7Q9UBY9 170 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 WASF3Q9UPY6 502 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 FBXO7Q9Y3I1 522 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 KLF2Q9Y5W3 355 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-224ENST00000610907 OTOGLQ3ZCN5 2332 aa8.76□□□□□ -1.01
PABPC1-224ENST00000610907 FREM2Q5SZK8 3169 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 WDFY4Q6ZS81 3184 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 MEX3AA1L020 520 aaKnown RBP8.75□□□□□ -1.01
PABPC1-224ENST00000610907 SPINT2O43291 252 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 PPIHO43447 177 aaKnown RBP8.75□□□□□ -1.01
PABPC1-224ENST00000610907 IGHV3-13P01766 116 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 CRYABP02511 175 aaKnown RBP8.75□□□□□ -1.01
PABPC1-224ENST00000610907 MT-ND4LP03901 98 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 P0C879 139 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 GABRA2P47869 451 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 CEBPDP49716 269 aaPredicted RBP8.75□□□□□ -1.01
PABPC1-224ENST00000610907 RAB13P51153 203 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 UBE2KP61086 200 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 COL10A1Q03692 680 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 ATP6V1FQ16864 119 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 LRRC75BQ2VPJ9 315 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 KHDC3LQ587J8 217 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 AWAT1Q58HT5 328 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 ZNF506Q5JVG8 444 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 PRAMEF6Q5VXH4 476 aa8.75□□□□□ -1.01
PABPC1-224ENST00000610907 Q6ZS92 163 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms