RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 GAPDHP04406 335 aaKnown RBP15.26■□□□□ 0.03
SGMS1-208ENST00000608287 SNRNP70P08621 437 aaKnown RBP15.26■□□□□ 0.03
SGMS1-208ENST00000608287 IL3RAP26951 378 aa15.26■□□□□ 0.03
SGMS1-208ENST00000608287 ZNF816Q0VGE8 651 aaPredicted RBP15.26■□□□□ 0.03
SGMS1-208ENST00000608287 HES1Q14469 280 aa15.26■□□□□ 0.03
SGMS1-208ENST00000608287 MOB3BQ86TA1 216 aa15.26■□□□□ 0.03
SGMS1-208ENST00000608287 FAM89BQ8N5H3 189 aa15.26■□□□□ 0.03
SGMS1-208ENST00000608287 OR5AU1Q8NGC0 362 aa15.26■□□□□ 0.03
SGMS1-208ENST00000608287 TMEM272A0A1B0GTI8 110 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 FAM90A9PA6NNJ1 464 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 KCTD21Q4G0X4 260 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 SLC25A48Q6ZT89 311 aaKnown RBP15.25■□□□□ 0.03
SGMS1-208ENST00000608287 THNSL2Q86YJ6 484 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 ZNF439Q8NDP4 499 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 OR52L2PQ8NGH6 319 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 TXNL4BQ9NX01 149 aaKnown RBP15.25■□□□□ 0.03
SGMS1-208ENST00000608287 ABRACLQ9P1F3 81 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 AK3Q9UIJ7 227 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 RAB22AQ9UL26 194 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 STUB1Q9UNE7 303 aa15.25■□□□□ 0.03
SGMS1-208ENST00000608287 IGHV1-3A0A0C4DH29 117 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 TCRBV4S1A1TA0A5B7 111 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 SMIM30A4D0T7 59 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 IFITM5A6NNB3 132 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 LDLRAD4O15165 306 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 NAPSAO96009 420 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 TMEM11P17152 192 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 HOXD3P31249 432 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-208ENST00000608287 ZNF134P52741 427 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 TMEM50BP56557 158 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 PLA2G7Q13093 441 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 HNF4GQ14541 408 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 GNMTQ14749 295 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 HMGN3Q15651 99 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 NEDD8Q15843 81 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 TMEM95Q3KNT9 176 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 ABCA11PQ4W5N1 156 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 MORN2Q502X0 79 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 CT45A1Q5HYN5 189 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 OR4X2Q8NGF9 303 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 OR56B1Q8NGI3 324 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 CT45A3Q8NHU0 189 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 GALMQ96C23 342 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 ARHGAP5-AS1Q96IT6 56 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 JPT1Q9UK76 154 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 HSF4Q9ULV5 492 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 SSR3Q9UNL2 185 aa15.24■□□□□ 0.03
SGMS1-208ENST00000608287 IGHV3-72A0A0B4J1Y9 119 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 FOXI3A8MTJ6 420 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-208ENST00000608287 IGKV1D-33P01593 117 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 IGKV1-33P01594 117 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 LPLP06858 475 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 FGF9P31371 208 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-208ENST00000608287 PPP1CCP36873 323 aaKnown RBP15.23■□□□□ 0.03
SGMS1-208ENST00000608287 HTD2P86397 168 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 CASC10Q5T4H9 136 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 MUC7Q8TAX7 377 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 RTN4IP1Q8WWV3 396 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-208ENST00000608287 IL1F10Q8WWZ1 152 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 ST6GALNAC6Q969X2 333 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 HDHD3Q9BSH5 251 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-208ENST00000608287 PECRQ9BY49 303 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 OR51E2Q9H255 320 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 RIMS4Q9H426 269 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-208ENST00000608287 MOB4Q9Y3A3 225 aa15.23■□□□□ 0.03
SGMS1-208ENST00000608287 A0A0B4J203 849 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 SH2D7A6NKC9 451 aaPredicted RBP15.22■□□□□ 0.03
SGMS1-208ENST00000608287 M0QZK8 103 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 RGS11O94810 467 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 C9orf152Q5JTZ5 239 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 ZNF880Q6PDB4 577 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 MOB1BQ7L9L4 216 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 NR2C2APQ86WQ0 139 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 TGIF2LXQ8IUE1 241 aa15.22■□□□□ 0.03
SGMS1-208ENST00000608287 YPEL1O60688 119 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 AMY1AP04745 511 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 AMY2AP04746 511 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 PLAC9Q5JTB6 97 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 STEAP3Q658P3 488 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 CENPVQ7Z7K6 275 aaPredicted RBP15.21■□□□□ 0.03
SGMS1-208ENST00000608287 YPEL2Q96QA6 119 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 CMSS1Q9BQ75 279 aaKnown RBP15.21■□□□□ 0.03
SGMS1-208ENST00000608287 CHCHD6Q9BRQ6 235 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 ABHD14AQ9BUJ0 271 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 C12orf4Q9NQ89 552 aa15.21■□□□□ 0.03
SGMS1-208ENST00000608287 TRBV6-6A0A0A6YYG2 114 aa15.2■□□□□ 0.02
SGMS1-208ENST00000608287 TXNL1O43396 289 aa15.2■□□□□ 0.02
SGMS1-208ENST00000608287 RAMP3O60896 148 aa15.2■□□□□ 0.02
SGMS1-208ENST00000608287 SLC2A2P11168 524 aaPredicted RBP15.2■□□□□ 0.02
SGMS1-208ENST00000608287 ZNF137PP52743 207 aa15.2■□□□□ 0.02
SGMS1-208ENST00000608287 DGCR2P98153 550 aa15.2■□□□□ 0.02
SGMS1-208ENST00000608287 TPRA1Q86W33 373 aa15.2■□□□□ 0.02
SGMS1-208ENST00000608287 RAB3CQ96E17 227 aa15.2■□□□□ 0.02
SGMS1-208ENST00000608287 LOC100506127A0A0U1RQW1 187 aa15.19■□□□□ 0.02
SGMS1-208ENST00000608287 NOTOA8MTQ0 251 aa15.19■□□□□ 0.02
SGMS1-208ENST00000608287 CD36P16671 472 aa15.19■□□□□ 0.02
SGMS1-208ENST00000608287 RAB6AP20340 208 aa15.19■□□□□ 0.02
SGMS1-208ENST00000608287 GADD45AP24522 165 aa15.19■□□□□ 0.02
SGMS1-208ENST00000608287 HLA-DRB3P79483 266 aa15.19■□□□□ 0.02
SGMS1-208ENST00000608287 MRPS15P82914 257 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms