RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 SHOXO15266 292 aa12.6□□□□□ -0.39
CCDC12-211ENST00000604367 FGF16O43320 207 aa12.6□□□□□ -0.39
CCDC12-211ENST00000604367 ZNF737O75373 536 aa12.6□□□□□ -0.39
CCDC12-211ENST00000604367 FAM157CP0CG43 387 aa12.6□□□□□ -0.39
CCDC12-211ENST00000604367 TNFAIP6P98066 277 aaPredicted RBP12.6□□□□□ -0.39
CCDC12-211ENST00000604367 TUSC1Q2TAM9 212 aa12.6□□□□□ -0.39
CCDC12-211ENST00000604367 OR10Z1Q8NGY1 313 aa12.6□□□□□ -0.39
CCDC12-211ENST00000604367 IL22RA2Q969J5 263 aa12.6□□□□□ -0.39
CCDC12-211ENST00000604367 DPRXA6NFQ7 191 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
CCDC12-211ENST00000604367 ZP3P21754 424 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 OMGP23515 440 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 BSPH1Q075Z2 132 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 GPR157Q5UAW9 335 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 GPR146Q96CH1 333 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 PLPPR2Q96GM1 343 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 PLEKHF2Q9H8W4 249 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 WFDC1Q9HC57 220 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 USF3Q68DE3 2245 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 IGKV1-39P01597 117 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 IGKV1D-39P04432 117 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 THBDP07204 575 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 PVALBP20472 110 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-211ENST00000604367 CD80P33681 288 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 AKR1C2P52895 323 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 OR2B11Q5JQS5 317 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 STPG2Q8N412 459 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 GCM1Q9NP62 436 aa12.59□□□□□ -0.39
CCDC12-211ENST00000604367 CLEC18AA5D8T8 446 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 WRBO00258 174 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 PTAFRP25105 342 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 CFHR2P36980 270 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 EDDM3BP56851 147 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 VAMP2P63027 116 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 RBPJQ06330 500 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 EIF5AL1Q6IS14 154 aaKnown RBP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 BTNL3Q6UXE8 466 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 Q6ZRM9 215 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 CLEC18CQ8NCF0 446 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 DEFB108BQ8NET1 73 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 JKAMPQ9P055 326 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 TRGV8A0A0C4DH27 118 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 SIGLEC5O15389 551 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 CYB5R3P00387 301 aaPredicted RBP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 LHBP01229 141 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 SELLP14151 372 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ID3Q02535 119 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 AKR1C1Q04828 323 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ZNF585BQ52M93 769 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ADAM5Q6NVV9 412 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ZCCHC24Q8N2G6 241 aaKnown RBP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 EIF4E3Q8N5X7 224 aaKnown RBP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 RND1Q92730 232 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 NARS2Q96I59 477 aaKnown RBP12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ABHD14BQ96IU4 210 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 LURAP1Q96LR2 239 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 COQ3Q9NZJ6 369 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 LPAR3Q9UBY5 353 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 DSCAMO60469 2012 aa12.58□□□□□ -0.4
CCDC12-211ENST00000604367 ODAMA1E959 279 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 KRBOX1C9JBD0 128 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 CHST1O43916 411 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 MED6O75586 246 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 TMEM50AO95807 157 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 CLINT1Q14677 625 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 TGIF2LYQ8IUE0 185 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 UBAC2Q8NBM4 344 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 NUP37Q8NFH4 326 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 HRH4Q9H3N8 390 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 C11orf1Q9H5F2 150 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 CACNG5Q9UF02 275 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 IL19Q9UHD0 177 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 PKDREJQ9NTG1 2253 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 ATRXP46100 2492 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 NBASA2RRP1 2371 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 IGSF23A1L1A6 192 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 B8ZZF3 427 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 SPINT2O43291 252 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 RAMP3O60896 148 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 CRYZL1O95825 349 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 CCL8P80075 99 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 FAM90A1Q86YD7 464 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 MARC2Q969Z3 335 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 SNX22Q96L94 193 aa12.57□□□□□ -0.4
CCDC12-211ENST00000604367 POLEQ07864 2286 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 ST8SIA5O15466 376 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 IGKV1-5P01602 117 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 IGHV3-7P01780 117 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 OR4A8P0C604 315 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 LINC00205P59089 165 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 RPL30P62888 115 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms