RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CD7P09564 240 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 RAB3AP20336 220 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 OR3A3P47888 321 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 ADARB1P78563 741 aaKnown RBP8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 ALKBH1Q13686 389 aaKnown RBP8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 AKIRIN2Q53H80 203 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 C6orf183Q5T699 404 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 SYT6Q5T7P8 510 aaPredicted RBP8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 FAM131AQ6UXB0 335 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 ASCL4Q6XD76 172 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 AQP12AQ8IXF9 295 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 ODF3L1Q8IXM7 274 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 PARP16Q8N5Y8 322 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 OR51A2Q8NGJ7 313 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 OR4K15Q8NH41 348 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 CLCC1Q96S66 551 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 OR2S2Q9NQN1 319 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 ZNF355PQ9NSJ1 428 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 SLC2A8Q9NY64 477 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 ING4Q9UNL4 249 aa8.9□□□□□ -0.98
PDLIM1P1-201ENST00000604187 VPS13DQ5THJ4 4388 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SAA2-SAA4A0A096LPE2 208 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 J3QLW9 94 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SAA2P0DJI9 122 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 ZNF19P17023 458 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 HOXB6P17509 224 aaKnown RBP8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SERPINA2P20848 420 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 PPP1CCP36873 323 aaKnown RBP8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 CEMP1Q6PRD7 247 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 ZNF833PQ6ZTB9 187 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 KCTD20Q7Z5Y7 419 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 LINC00596Q86U02 117 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 POC5Q8NA72 575 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 OR52L2PQ8NGH6 319 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TSEN15Q8WW01 171 aaKnown RBP8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 NRBF2Q96F24 287 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 PELI1Q96FA3 418 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 METTL9Q9H1A3 318 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SIGLEC8Q9NYZ4 499 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 IL36GQ9NZH8 169 aa8.89□□□□□ -0.99
PDLIM1P1-201ENST00000604187 DAPL1A0PJW8 107 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 OR11H12B2RN74 326 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TRBV12-3P01733 135 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 RCC1P18754 421 aaPredicted RBP8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 ALDH3A2P51648 485 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 DEFA5Q01523 94 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 EWSR1Q01844 656 aaKnown RBP eCLIP8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TMED1Q13445 227 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 DYRK1AQ13627 763 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 MPV17LQ2QL34 196 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 MOGAT2Q3SYC2 334 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 CD300EQ496F6 205 aaPredicted RBP8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 MORN2Q502X0 79 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 ZNF529Q6P280 563 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SPATA24Q86W54 205 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 LAX1Q8IWV1 398 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 OR2K2Q8NGT1 345 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 GRPEL2Q8TAA5 225 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 RFKQ969G6 155 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 MRPS24Q96EL2 167 aaKnown RBP8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 C4orf36Q96KX1 117 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TAF9BQ9HBM6 251 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TAS2R4Q9NYW5 299 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SLC23A1Q9UHI7 598 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 PKHD1P08F94 4074 aa8.88□□□□□ -0.99
PDLIM1P1-201ENST00000604187 A0A0G2JLM5 398 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 A0A1W2PP11 408 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 DCTN3O75935 186 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 OR2A4O95047 310 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 CA2P00918 260 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TATDN3Q17R31 274 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 RPEL1Q2QD12 228 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 HSP90B2PQ58FF3 399 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TRAT1Q6PIZ9 186 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 ZNF562Q6V9R5 426 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 OR5T1Q8NG75 326 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 OR8J1Q8NGP2 316 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 OVOL2Q9BRP0 275 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SPACA1Q9HBV2 294 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 RCC2Q9P258 522 aaKnown RBP8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 PEF1Q9UBV8 284 aaKnown RBP8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 JPT1Q9UK76 154 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 ARL2BPQ9Y2Y0 163 aa8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 KLK5Q9Y337 293 aaPredicted RBP8.87□□□□□ -0.99
PDLIM1P1-201ENST00000604187 A0A0J9YWU9 116 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 TMEM212A6NML5 194 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 ZNF785A8K8V0 405 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 MCRIP1C9JLW8 97 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 H3BUA1 57 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 FADS2O95864 444 aaKnown RBP8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 GSTP1P09211 210 aaKnown RBP8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 POLR2IP36954 125 aaKnown RBP8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SOX2P48431 317 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 MECP2P51608 486 aaKnown RBP8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 GUCA2BQ16661 112 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 SLC22A6Q4U2R8 563 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 RAB12Q6IQ22 244 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 GLDNQ6ZMI3 551 aaPredicted RBP8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 C5orf24Q7Z6I8 188 aa8.86□□□□□ -0.99
PDLIM1P1-201ENST00000604187 GAPTQ8N292 157 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms