RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 NECAP2Q9NVZ3 263 aa14.3□□□□□ -0.12
CCDC12-208ENST00000603885 PLEKHJ1Q9NW61 149 aa14.3□□□□□ -0.12
CCDC12-208ENST00000603885 ERICH4A6NGS2 130 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 SLC17A2O00624 439 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 RPL23AP62750 156 aaKnown RBP14.29□□□□□ -0.12
CCDC12-208ENST00000603885 LSAMPQ13449 338 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 LY6G6FQ5SQ64 297 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 MOB1BQ7L9L4 216 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 SVOPQ8N4V2 548 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 OR51D1Q8NGF3 324 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 CNBD2Q96M20 576 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 GFI1Q99684 422 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 GON7Q9BXV9 100 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 ZFP57Q9NU63 452 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 BLOC1S6Q9UL45 172 aa14.29□□□□□ -0.12
CCDC12-208ENST00000603885 AK6Q9Y3D8 172 aaKnown RBP14.29□□□□□ -0.12
CCDC12-208ENST00000603885 A0A0A6YYD4 124 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 LINC01548A6NM66 108 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 NAPSAO96009 420 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 CALRP27797 417 aaKnown RBP14.28□□□□□ -0.12
CCDC12-208ENST00000603885 MAP2K4P45985 399 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 RAB11BQ15907 218 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 OR2AK2Q8NG84 335 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 SETD6Q8TBK2 473 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 IL1F10Q8WWZ1 152 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 RCC1LQ96I51 464 aaKnown RBP14.28□□□□□ -0.12
CCDC12-208ENST00000603885 LPAR5Q9H1C0 372 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 ACOT13Q9NPJ3 140 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 STEAP1Q9UHE8 339 aa14.28□□□□□ -0.12
CCDC12-208ENST00000603885 NUDT19A8MXV4 375 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 RRP9O43818 475 aaKnown RBP14.27□□□□□ -0.13
CCDC12-208ENST00000603885 SLC6A1P30531 599 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 RANBP1P43487 201 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 FABP5Q01469 135 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 TBCEQ15813 527 aaPredicted RBP14.27□□□□□ -0.13
CCDC12-208ENST00000603885 FOXB2Q5VYV0 432 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 ZNF880Q6PDB4 577 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 TEX38Q6PEX7 206 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 ZNF367Q7RTV3 350 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 ODF3L1Q8IXM7 274 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 FAM71E2Q8N5Q1 922 aa14.27□□□□□ -0.13
CCDC12-208ENST00000603885 MRPL20Q9BYC9 149 aaKnown RBP14.27□□□□□ -0.13
CCDC12-208ENST00000603885 RIMS4Q9H426 269 aaPredicted RBP14.27□□□□□ -0.13
CCDC12-208ENST00000603885 SOCS1O15524 211 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 DUS4LO95620 317 aaKnown RBP14.26□□□□□ -0.13
CCDC12-208ENST00000603885 SOX6P35712 828 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 F2RL1P55085 397 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 MMDQ15546 238 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 PNLIPRP3Q17RR3 467 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 Q6ZPA2 131 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 FAM89BQ8N5H3 189 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 AK3Q9UIJ7 227 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 HSF4Q9ULV5 492 aa14.26□□□□□ -0.13
CCDC12-208ENST00000603885 SAA2-SAA4A0A096LPE2 208 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 TRBV6-6A0A0A6YYG2 114 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 SAA2P0DJI9 122 aaPredicted RBP14.25□□□□□ -0.13
CCDC12-208ENST00000603885 OR3A3P47888 321 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 PSMD7P51665 324 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 ETV3LQ6ZN32 361 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 ZNF833PQ6ZTB9 187 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 C8orf86Q6ZUL3 223 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 LINC00482Q8N8I6 264 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 KLHL30-AS1Q8NEE0 82 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 MRAPQ8TCY5 172 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 FAM3DQ96BQ1 224 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 RBMXL1Q96E39 390 aaKnown RBP14.25□□□□□ -0.13
CCDC12-208ENST00000603885 NABP2Q9BQ15 211 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 HSPB9Q9BQS6 159 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 IFI27L2Q9H2X8 130 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 AURKAIP1Q9NWT8 199 aaPredicted RBP14.25□□□□□ -0.13
CCDC12-208ENST00000603885 RAB26Q9ULW5 256 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 MGAT4AQ9UM21 535 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 V9GY05 133 aa14.25□□□□□ -0.13
CCDC12-208ENST00000603885 VDAC1P21796 283 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 THBS3P49746 956 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 VEGFCP49767 419 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 CLDN12P56749 244 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 ACTBP60709 375 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 CXorf66Q5JRM2 361 aaPredicted RBP14.24□□□□□ -0.13
CCDC12-208ENST00000603885 FAM71F2Q6NXP2 309 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 C18orf65Q6ZTR6 163 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 ZNF695Q8IW36 515 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 MRPL41Q8IXM3 137 aaKnown RBP14.24□□□□□ -0.13
CCDC12-208ENST00000603885 ZNF251Q9BRH9 671 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 HDHD3Q9BSH5 251 aaPredicted RBP14.24□□□□□ -0.13
CCDC12-208ENST00000603885 C12orf4Q9NQ89 552 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 PIPOXQ9P0Z9 390 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 SLC23A1Q9UHI7 598 aa14.24□□□□□ -0.13
CCDC12-208ENST00000603885 ZNF107Q9UII5 783 aaPredicted RBP14.24□□□□□ -0.13
CCDC12-208ENST00000603885 FOXI3A8MTJ6 420 aaPredicted RBP14.23□□□□□ -0.13
CCDC12-208ENST00000603885 RAB29O14966 203 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 ST8SIA5O15466 376 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 SLC2A2P11168 524 aaPredicted RBP14.23□□□□□ -0.13
CCDC12-208ENST00000603885 HLA-DRB3P79483 266 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 FOXE3Q13461 319 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 SSX1Q16384 188 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 C2orf76Q3KRA6 126 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 OR56B1Q8NGI3 324 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 ARHGAP5-AS1Q96IT6 56 aa14.23□□□□□ -0.13
CCDC12-208ENST00000603885 GPR61Q9BZJ8 451 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms